Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1644865 316 2e-81 >seq1644865 Length=2180 Score = 316 bits (350), Expect = 2e-81 Identities = 539/780 (69%), Gaps = 6/780 (1%) Strand=Plus/Minus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| ||||||| ||||| ||||| ||| || |||||||||||||| ||||| | Sbjct 791 AACACCACATTTTTGATATTCACCTACTCTCTTCTCAAAGAAATTAGTTTTCCCTTCGAG 732 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 |||||||| ||||| || || || ||||| | || || || |||||||| | Sbjct 731 GGAAATATTCTCCATGAAGTCTAAAGGATTTTCAACTTTATAGTGCTTTTCACATCCCAA 672 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| | | || || || |||||||| || ||||| |||| | | || || || Sbjct 671 CTCTATTAAAAGTCTATCGGCGACAAATTCAATGTACTGTTTCATTAATGTACAATTCAT 612 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486 |||||||| || || | || | ||| || || |||||||| || | ||||| || Sbjct 611 TCCAATTAGAGCAACGGGCAATGCATCTGTTAAGAATTCTTGTTCAATTGAAACGGCGTC 552 Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAA 4546 ||| ||||| || | | | || ||| |||||||| || | | ||||| ||| Sbjct 551 TGTAATTATTTCCGTGACAGTTTCCTTACTAGGTTTATTAACCAGATGCTTAAACATTAA 492 Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||||| ||||| ||| | |||||| || || || ||||||||| ||| || | Sbjct 491 GCACGCGAAATCGGTATGAAGACCTTCATCCCTAGATATAAGTTCGTTACTAAAAGTAAG 432 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 ||| ||||| | |||||||| || |||||||| ||||| ||||| || ||| || || Sbjct 431 TCCTGGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCAAAAGATCCACTGAAAAA 372 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT 4726 ||| ||||| || | ||||||||| || | || || | || |||| || || Sbjct 371 TATCCCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAAGAA---GCTTCTTCATT 315 Query 4727 ---AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783 |||||| ||| ||||||| ||||| || || || || || | || | || || Sbjct 314 GCCAATCCAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGGAGAGTTTCGATGGC 255 Query 4784 GTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 |||||| | ||| ||||||| || || ||||| || || || |||| ||||| Sbjct 254 GTTAAAGAGTTTCGTTTTTTCTTTAGGATCAGATATATAGGTATCGATCAGTAAACTATA 195 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 ||||||| || | ||||| || |||||| || ||||||||| | || ||||| | Sbjct 194 CATTTCACTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAGAACCTTGCTTCAGG 135 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 ||||||| || | || || || || || ||||| ||||| || || || || || Sbjct 134 AACTTGAATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGACAATTCCATCCGATGC 75 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCA 5023 ||||| || |||| |||||| || || || | |||| || |||| |||||| ||||| Sbjct 74 AGCAAAGAATGCCAGAACATGGGAGATGAAATGACGTTCATCTGGCTGAAGTTTGTTCCA 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418391344984148