Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1644865 363 2e-95 seq509544 91.5 2e-13 >seq1644865 Length=2180 Score = 363 bits (402), Expect = 2e-95 Identities = 560/798 (70%), Gaps = 6/798 (1%) Strand=Plus/Minus Query 46315 TCTTCTTGTGA---CATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAA 46371 ||||||| || |||||| || |||||| ||||||||||| | ||||| || ||| Sbjct 808 TCTTCTTCGGAACTCATAACACCACATTTTTGATATTCACCTACTCTCTTCTCAAAGAAA 749 Query 46372 TTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAA 46431 |||||||| ||||| | || ||||| ||||| || || || ||||| ||| ||||| Sbjct 748 TTAGTTTTCCCTTCGAGGGAAATATTCTCCATGAAGTCTAAAGGATTTTCAACTTTATAG 689 Query 46432 AtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTC 46491 |||| | |||| || ||| | |||||||| || || ||||| || ||| |||| Sbjct 688 TGCTTTTCACATCCCAACTCTATTAAAAGTCTATCGGCGACAAATTCAATGTACTGTTTC 629 Query 46492 ATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGT 46551 || | | |||||||||||| || || || || | || || || | || |||||| Sbjct 628 ATTAATGTACAATTCATTCCAATTAGAGCAACGGGCAATGCATCTGTTAAGAATTCTTGT 569 Query 46552 TCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATC 46611 ||||| | || || || | ||||| || || ||||||| ||| ||| || | | Sbjct 568 TCAATTGAAACGGCGTCTGTAATTATTTCCGTGACAGTTTCCTTACTAGGTTTATTAACC 509 Query 46612 AAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAAT 46671 | ||| ||||||||||| || || ||||| |||||| |||||||| ||| || | | Sbjct 508 AGATGCTTAAACATTAAGCACGCGAAATCGGTATGAAGACCTTCATCCCTAGATATAAGT 449 Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 |||||| ||| || || || ||||| ||||| | ||| ||||||||||| ||||| || Sbjct 448 TCGTTACTAAAAGTAAGTCCTGGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCA 389 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791 ||||||||| || ||||| ||||| |||| || || || |||| ||| || ||||| Sbjct 388 AAAGATCCACTGAAAAATATCCCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAA 329 Query 46792 CTGG---CATCATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848 | | ||||| |||||| | | |||||| || || || || || ||||| || Sbjct 328 GAAGCTTCTTCATTGCCAATCCAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGG 269 Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908 | ||||| || || |||||||| ||||||| | | ||| | ||| ||||| Sbjct 268 AGAGTTTCGATGGCGTTAAAGAGTTTCGTTTTTTCTTTAGGATCAGATATATAGGTATCG 209 Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968 || | | |||||||||||| |||| |||||| || ||||| || |||||||| Sbjct 208 ATCAGTAAACTATACATTTCACTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAG 149 Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACT 47028 | |||||||||| || || | |||| || || | || ||| ||||| || || Sbjct 148 AACCTTGCTTCAGGAACTTGAATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGACA 89 Query 47029 ATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTA 47088 |||||||| |||||||| ||||||| ||||| || |||| |||||| | Sbjct 88 ATTCCATCCGATGCAGCAAAGAATGCCAGAACATGGGAGATGAAATGACGTTCATCTGGC 29 Query 47089 GTCAGTTTATTCCAGTCA 47106 ||||| ||||| ||| Sbjct 28 TGAAGTTTGTTCCAATCA 11 >seq509544 Length=375 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/157 (73%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| || |||||||||||| || || || || | | || |||||||| |||| Sbjct 273 TCCAGCCATAGAAATGCATGGAGGTGAGCTTCCTATGATTTGGCGACGCTATATGTATAT 214 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 | | ||||||||| ||||| |||||||||||||| || || ||||| | | || || Sbjct 213 TGAGCGACTGACTCTGATCTATGAAAGCTCCTCTGTCGGCAGCCATCTCCAAAACTACCT 154 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTG-AAAACTTGTT 75599 |||| ||||| ||||| | || ||| | ||||| || Sbjct 153 TTTGGGGAATCTCCCACACTGTCTTGTATAACTTCTT 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698109321265920