Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1488354 141 2e-28 seq1656961 131 4e-25 seq770237 116 8e-21 seq242576 113 1e-19 seq252373 107 4e-18 seq678478 98.7 2e-15 seq1135619 96.9 8e-15 seq663341 96.9 8e-15 >seq1488354 Length=939 Score = 141 bits (156), Expect = 2e-28 Identities = 172/233 (74%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| || | || | |||||| ||||| |||||||| || ||||| || || || Sbjct 145 CCTGAGCCTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTCAATGT 204 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 ||| |||||||| | ||| || || || |||||||| || ||||| | | || || Sbjct 205 TCTTCCATCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGAATACC 264 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 || || || ||||||||| ||||||| | |||| | |||| ||| |||||||| | Sbjct 265 CTCTTTATCCTGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACTTCCAA 324 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTA 152114 |||||||||||| || || ||||| ||||| || | |||||| ||| |||| Sbjct 325 AGTAATAGTTTTACCAGTTAGAGTTTTCACAAAAATTTGCATTCCACCTCTTA 377 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || |||||||| | |||||||| || || || |||||||| ||| |||||||| Sbjct 607 TCTAAGAACAAGATGTAATGTAGACTCCTTCTGAATATTGTAATCACTTAATGTTCTCCC 666 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | |||||| || ||||||||||| || ||||||| | ||| ||||| || Sbjct 667 ATCTTCCAACTGTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATACCTTCTTT 726 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||||||| || ||| | || | |||||||| |||||||| | ||| || Sbjct 727 ATCCTGAATTTTTGCCTTAACATTTTCAATAGTGTCTGAAGATTCTACTTCCAAAGTTAT 786 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || | ||| || || |||| |||||| Sbjct 787 GGTCTTTCCAGTTAAAGTTTTGACAAAGATCTGCAT 822 Score = 114 bits (126), Expect = 3e-20 Identities = 165/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAA-GTTCTCCCATC 151951 || |||||||| | || || || ||||| || || ||||| |||| ||||| ||||| Sbjct 383 AGCACAAGATGTAATGTGGATTCCTTTTGAATATTATAATCA-CTAAGCGTTCTGCCATC 441 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 |||||| ||| || || || || | ||||| ||||| | | || || || || || Sbjct 442 TTCTAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTGGAATACCCTCTTTATC 501 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||||||| ||| ||| | || | |||||||| ||||||||| | || ||||| Sbjct 502 CTGAATTTTTGCTTTCACATTTTCAATTGTGTCTGAAGGCTCTACTTCCAAGGTGATAGT 561 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT-TTACCCTTACTCTA 152119 ||| ||||| | |||||||| || | |||||| | | |||| |||| Sbjct 562 TTTTCCCGTTAAGGTCTTCACAAAAATTTGCATTCCTCCTCTTAATCTA 610 >seq1656961 Length=2936 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 |||| |||||||||||||| | | |||| ||||||||| || ||| || ||||||| Sbjct 2618 CTTTCTGGATGTTGTAATCAGAGAGGGTTCGCCCATCTTCAAGTTGTTTTCCTGCGAAGA 2677 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | || || ||||| | | |||||||||||| ||||||||||| ||| ||| | | Sbjct 2678 TTAATCTTTGTTGGTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGCTTTTACATTTT 2737 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | |||||| ||| |||||||||||||| ||||| || || | || || || | Sbjct 2738 CAATAGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTACCAGTTAACGTTTTAACAA 2797 Query 152095 AGACCTGCAT 152104 ||| |||||| Sbjct 2798 AGATCTGCAT 2807 >seq770237 Length=425 Score = 116 bits (128), Expect = 8e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| ||||| || ||||||||||| ||||| || | ||| | |||||| || || Sbjct 257 ATGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTGAGAGTACGCCCATCCTCAAGCTG 198 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || || || | ||| |||||||| | | ||| ||||| || |||||||| || Sbjct 197 TTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATCTT 138 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | |||||| | || | | |||||| ||| ||||| || || || || || || || Sbjct 137 TGCCTTGACATTTTCAATTGTATCTGAAGGCTCAACTTCTAGTGTTATGGTCTTCCCAGT 78 Query 152081 GAGAGTCTTCACGAAGACCTGCATTTT 152107 | ||| ||||| |||| ||||||||| Sbjct 77 CAAAGTTTTCACAAAGATCTGCATTTT 51 >seq242576 Length=334 Score = 113 bits (124), Expect = 1e-19 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 151923 ATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTC 151982 || |||||||| ||| |||||||||||||| | |||||| || ||||||||||| Sbjct 2 ATATTGTAATCACTTAATGTTCTCCCATCTTCCAACTGTTTCCCTGCAAAGATAAGCCTT 61 Query 151983 TGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTG 152042 || ||||||| | ||| ||||| || || ||||||||| || ||| | || | || Sbjct 62 TGTTGGTCCGGTGGGATACCTTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATAGTG 121 Query 152043 TCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGC 152102 ||||| |||||||| | ||| || || || || || | ||| || || |||| |||| Sbjct 122 TCTGACGATTCTACTTCCAAAGTTATGGTCTTTCCAGTTAAAGTTTTGACAAAGATCTGC 181 Query 152103 AT 152104 || Sbjct 182 AT 183 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||||||||| || || |||||||| || || |||||| || ||||| |||||| Sbjct 200 AGAACAAGATGAAGCGTGGATTCTTTTTGTATATTATAATCGCTCAATGTTCTACCATCT 259 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || || |||||||| || || || | | ||| ||||| || || Sbjct 260 TCAAGTTGTTTACCAGCAAATATAAGCCTTTGTTGATCTGGTGGGATACCTTCTTTATCC 319 Query 152013 TGAATTTTT 152021 ||||||||| Sbjct 320 TGAATTTTT 328 >seq252373 Length=335 Score = 107 bits (118), Expect = 4e-18 Identities = 157/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || | ||| | |||| ||||||| || || |||||||||| | |||| | Sbjct 38 AGTCTGAGTACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGACAGTGTTCGC 97 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| | ||| || || ||||| | | ||| ||||| | | |||||||| Sbjct 98 CCATCTTCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCTTCT 157 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGA 152063 || ||||||||||| || ||| | || | | | || ||| ||| || || ||| Sbjct 158 TTATCTTGAATTTTAGCCTTTACATTTTCAATGGTATC---ACTTGCCTCAACCTCTAGA 214 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || || | |||||| ||||| | ||||| Sbjct 215 GTTATAGTCTTCCCAGTCAAAGTCTTAACGAAAATTTGCAT 255 >seq678478 Length=406 Score = 98.7 bits (108), Expect = 2e-15 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| || || |||||||||||||||||||| || || || | |||||| Sbjct 210 AGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTCAATGTACGACCATCT 151 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 ||||| ||||| || || || || | ||||| || || | | || ||||| || | Sbjct 150 TCTAGTTGCTTT--CCAGCAAAAATCAATCTCTGTTGATCGGGTGGAATGCCTTCTTTGT 93 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| ||||| ||| ||| |||| | |||||||| || ||||| || || || | Sbjct 92 CTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACTTCGAGGGTGATTG 33 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAA 152095 |||| || || || || || ||||| Sbjct 32 TTTTTCCTGTAAGGGTTTTGACGAA 8 >seq1135619 Length=547 Score = 96.9 bits (106), Expect = 8e-15 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--G 151958 ||||||||| ||||| |||||||||||||| || | || | |||||||| || | Sbjct 346 ATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCACTCAGTGTGCGACCATCTTCAAGTTG 287 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 |||| || || || || | ||||||||||| | | ||||||||| || ||||| ||| Sbjct 286 CTTT--CCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATTCCTTCTTTATCTTGGATT 229 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || || ||| | || | | |||||| || ||||||||||| || || || || Sbjct 228 TTAGCCTTAACATTTTCAATTGTATCTGAAGGTTCAACTTCAAGAGTGATGGTCTTTCCA 169 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || | || || || || | ||||| Sbjct 168 GTTAAGGTTTTGACAAATATTTGCAT 143 >seq663341 Length=403 Score = 96.9 bits (106), Expect = 8e-15 Identities = 155/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 151890 CTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAA-AGTTCTCCC 151948 || || || | ||| || || || ||||| ||||| || || || |||| ||| | || Sbjct 393 CTCAGAACTAAATGGAGTGTGGATTCTTTCTGGATATTATAGTCA-CTAAGAGTACGACC 335 Query 151949 ATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||| || ||||| || || || || | ||||||||||| | | || || || Sbjct 334 ATCTTCAAGTTGCTTT--CCAGCAAAAATTAATCTCTGCTGGTCTGGTGGAATACCCTCT 277 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| |||||| ||| ||| | || | |||| || || || || || ||| Sbjct 276 TTATCTTGGATTTTTGCTTTTACATTTTCGATAGTGTCAGATGCTTCAACCTCTAGGGTA 217 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| ||||| ||||| ||||| |||| ||||| Sbjct 216 ATAGTTTTCCCCGTAAGAGTTTTCACAAAGATTTGCAT 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1129227904342076