Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq6691 98.7 1e-15
>seq6691
Length=42033
Score = 98.7 bits (108), Expect = 1e-15
Identities = 211/310 (68%), Gaps = 4/310 (1%)
Strand=Plus/Plus
Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858
|| || |||||||| ||||| || |||| | ||||||||||| || | || | ||
Sbjct 14045 TCGGCCACAAATTCAATATACTGCGACATCAGGTCGCAGTTCATGCCCAGTAGTCTGACG 14104
Query 16859 GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA-CTAGC 16917
|| || || || || | ||| ||| || || | || || ||||| | ||| ||||
Sbjct 14105 GGCAGGGCGTCGGTGAGAAACTCTTGTTCAATGATGACAGCATCCTTGACGATAGCTAG- 14163
Query 16918 AACTCGTTCCTCGGACGGTGTATGT-TTAAGATGTTTAAACATCAGACATGCGAAATCGC 16976
|||||| | | ||| | ||| |||| ||||| ||||| || || || || ||||
Sbjct 14164 GACTCGTGCGGGGCTGGGTTTCTGTACTAAG-TGTTTGAACATGAGGCAGGCAAAGTCGC 14222
Query 16977 AATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTC 17036
| || | |||||||||| | ||| | ||||| || ||||| |||||||| |
Sbjct 14223 AGTGGAGACCCTCGTCTCGGGAGATCAACTCGTTGCTGAAGGTCAAGCCGGGCATGAGGC 14282
Query 17037 CTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096
| || ||||| | |||||| || | ||| || || || ||||| || || || |||
Sbjct 14283 CACGCTTCTTCAGCCAAAAGATGGAGGCAAAACTGCCGGAGAAGAAGATTCCTTCTACGC 14342
Query 17097 ATGCAAACGC 17106
| || || ||
Sbjct 14343 AAGCGAAGGC 14352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517100290827120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |