Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq742 311 1e-79
seq6691 134 2e-26
>seq742
Length=196864
Score = 311 bits (344), Expect = 1e-79
Identities = 1166/1808 (64%), Gaps = 39/1808 (2%)
Strand=Plus/Minus
Query 52847 TAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTG 52906
|| |||||||| || || | || | |||| || || || || ||| || || ||
Sbjct 48873 TAATACATTCCAGTCTTCAAGCCCATCTTCCAGCCATAGAAGTGGATAGAAGTGAGCTTT 48814
Query 52907 GAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCC 52966
|| | || ||||| | || || || | || |||||||| || || ||||||||
Sbjct 48813 CCGTAGTTGGGCTCTGCCACGTGTATGTTGAAGGACTGACTTTGGTCAATAAAGGCTCCT 48754
Query 52967 CTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGG--AATTTCCCAAATAGTTTTATAAA 53024
| ||| || ||||| || || | || |||||| | ||||||||||| || || || |
Sbjct 48753 CGGTCGGCTGCCATCTTGATCA--GTATTTTGTTGGAAATTTCCCAAACTGTCTTGTAGA 48696
Query 53025 C-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATAGATCCACCATCTACCATAA 53081
|| || | ||| | | | | | || ||||| ||||| | | || |
Sbjct 48695 GATCTCTGATGTGCTTGGGTATTCTGTCCAGGTTTTGAATGGATCCGTTGTTGGCAATGA 48636
Query 53082 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 53141
| ||| || || || || | ||| || | |||||| ||| | | || |||||
Sbjct 48635 TGAGATTTTTCATGTCGTCGTCCCACAAATCAGCCTCGGTCAAATCACGCAGTAGATGGT 48576
Query 53142 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 53201
|||| || || || |||||||||||||| || || | ||||| || || || | |
Sbjct 48575 GATTCACAACCTGGAATTCTCCAGACAAGACCCTTCTGGTGTAGATGTTGGAAGTGAAGG 48516
Query 53202 GTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 53261
|||| | || || || ||||| ||||| || || || || || || ||||| ||||| |
Sbjct 48515 GTTCAAAGGATTCGTTGTTTCCTAAAATCTGGGCGGTGGAGGCGGTAGGCATGGGTGCGA 48456
Query 53262 CCAATAAACTATTTC-TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTC 53320
|| | | | ||| | | |||| | | ||| ||| |||| | | |||| |||
Sbjct 48455 G-AAGCAGCGAGTTCCTGACTCCGTGTATCGCGATCTTAGCTTTCAAGGCAGCCCAGTTC 48397
Query 53321 CAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTA 53379
|| | ||| | || ||| ||||| || || ||| | | |
Sbjct 48396 CACAAATCTGTAGGCTTCTTGTCCCACATCTCATATTGAAGAATCCCTTTGCTGACAGGA 48337
Query 53380 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAA 53439
| ||||| || || ||||||| || |||||||| || || || ||||| || || |
Sbjct 48336 C-ATCCTGGGTACGTCTCGTATGTACCCTCCTTCTCGGCCAGCTCGCAACTTGCTTCCAG 48278
Query 53440 TGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATC 53499
||||||||||| | || || || || | | ||| ||| || |||| || ||
Sbjct 48277 AGCACCGTAATACAATGTCTCAAATATTTGTTGATTCAGAAGCTGGGCTTTTTCACTCTC 48218
Query 53500 AAATGGATAAT----TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGA 53555
||| || ||| |||||| || | || ||||| | ||||| | ||||||||||
Sbjct 48217 AAAAGGC-AATCTCATTAAGACAAAA---GCATCTGCCAGGCCTTGTATTCCAATACCGA 48162
Query 53556 TAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTA 53615
| || | || | | | || || || ||||||||| | ||| ||| | |||| || |
Sbjct 48161 TGGGGCGGTGACGCATGTTCGATGTTCTAGCTTCTGGTACAGGGTAAAAGTTAACGTCGA 48102
Query 53616 TAATTTTATTGAGGTTT---CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT 53672
||||||| || | ||| ||||| | ||| || |||||| || ||| |
Sbjct 48101 TAATTTTGTTCAAATTTTTAGTGACAGT---CTTGGTTACGATCTTCAGCTTTTCAAAGT 48045
Query 53673 CAAATTGTCCATCTAT-TACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCT 53731
| ||| || ||| ||||||||| || | || ||||| |||| ||| || || |||
Sbjct 48044 CGAATACCTTAT-TATCTACAAACATATTGACAGCGATAGAGGCCAAATTGCAGACAGCT 47986
Query 53732 ACCTCA--TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGG 53789
|| ||| || | | | |||| | ||| || ||||| || ||||| ||||| || |
Sbjct 47985 ACTTCATCTTTGGA--AGTGTATTCAACTATTTCTGTGCAGAGGTTACTGCACTTAATAG 47928
Query 53790 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCG 53849
|||| | ||||||||| || |||||| ||| ||||| ||||| || || ||| | || |
Sbjct 47927 TTCCCAGATTTTGTTGGTTGCTCTTTCGGTTGCACGCGTCCTTGTACAGCATGTAGGGGG 47868
Query 53850 TACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAG 53909
| || ||||| | || ||||| || || || |||| | | ||||| || |
Sbjct 47867 TTCCCGTTTCTACTTGAGATTCGATGATGGCCATCCACAAAGTCTGCGCCTTGATCTTCT 47808
Query 53910 ATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAA 53969
|| | | ||| |||||| |||| |||| ||||| || ||||||||
Sbjct 47807 TCTTAGAACGACCTTCGGCTTCGTAGCGTGTGTACAGAGCCTCAAATTCTTCTCCCCAGC 47748
Query 53970 CATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCA 54029
| || || || ||| || | || ||||| | ||| || ||| || |
Sbjct 47747 ACTCGTGTAAGCCGGGAGCATCGTGGGGGCACATGAGACTCCAATCCTCGTTGCTCTCGA 47688
Query 54030 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGT 54088
| || ||||| || ||||| || ||||| | ||| || |||| || | | | | |
Sbjct 47687 CACGCTTCATGAACAGATCGGGGATCCACA-AGCCGTAGAATAAGTCACGTGCACGAACT 47629
Query 54089 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 54148
||||| ||||| ||||||||||| | || | ||| | | || || | ||||||||
Sbjct 47628 TCCTCCTTTCCAGTATTCTTTTTCAAGTCTAAGAATTCAAATATGTCCGCGTGCCACGGC 47569
Query 54149 TCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 54208
|| | ||| || | | | |||| |||| |||||||||||||| |||| || | ||
Sbjct 47568 TCAACGTAAATAGCGAAAGCTCCGGGCCTCTTGTTTCCTCCCTGGTCTACATAGCGGGCC 47509
Query 54209 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 54268
|||||||| || || | || ||| || | | |||||||| | || || || || | |
Sbjct 47508 GTGTTATTGTACACACGCAGCATGGGGACCAACCCATTGGAGACTCCGTTAGTACCCGCG 47449
Query 54269 ATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATCCCCCCTGCCATTT 54326
|| ||| || |||| || || | | || ||| || || || || || || |
Sbjct 47448 ATGTAGGAACCCTTGGCTCGGATGCAGT-GTACATGA-AGGCCGATACCTCCAGCAGACT 47391
Query 54327 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 54386
| || | | || || | || | || || ||||| || || ||||||||||| |||
Sbjct 47390 TGGAAACCAGGGCACACTGCTTCAGGGTGTCGTAGATCCCTTCAATACTATCATCGCTCA 47331
Query 54387 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 54446
|| ||||| || || ||||| || |||| || | || |||| ||||
Sbjct 47330 TGGCCAGTAGGAAGCAAGAAGACAGCTGAGGACGGGGCGTGGCTGCGGAGAATAGAGTAG 47271
Query 54447 GAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTA 54506
| ||||| || || |||| || || || || ||||| || || || ||||| || |
Sbjct 47270 GGCTGGCGTGAGTGAAGTATTTCTCTGACAGAAGGTTGTAAGTTTCAATGGCTGAATCAA 47211
Query 54507 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 54566
| || || || || || | || | ||| | |||||| || |||||||| || |
Sbjct 47210 TGTCTTCCCCGTGGATACCGACAGATACCCTCATGAGCATGTGTTGCGGTCTTTCTACAA 47151
Query 54567 TCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 54626
|| | || ||||||| || || ||||| |||||||| ||||| ||||| |
Sbjct 47150 CTTTCCCTTCGATCTTCAGCAGATATGAGCGCTCCAAGGTTTTAAATCCAAAGTAGTTAT 47091
Query 54627 A--TGAAA 54632
| |||||
Sbjct 47090 AATTGAAA 47083
>seq6691
Length=42033
Score = 134 bits (148), Expect = 2e-26
Identities = 277/410 (68%), Gaps = 3/410 (1%)
Strand=Plus/Plus
Query 23970 TCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 24029
|| || ||||| || ||||| ||||| || || ||||| || | ||| | ||
Sbjct 14045 TCGGCCACAAATTCAATATACTGCGACATCAGGTCGCAGTTCATGCCCAGTAGTCTGACG 14104
Query 24030 GGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTT 24089
|| || || | || ||||| ||||||||||| ||| || || | | |||| |
Sbjct 14105 GGCAGGGCGTCGGTGAGAAACTCTTGTTCAATGATGACAGCATCCTTGACGATAGCTAGG 14164
Query 24090 ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAG 24149
||| | | || ||| | | ||| ||||| ||||| | || || || ||||||
Sbjct 14165 ACTCGTGCGGGGCTGGGTTTCTGTACTAAGTGTTTGAACATGAGGCAGGCAAAGTCGCAG 14224
Query 24150 TGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCA 24209
|| ||||||||||||| || || |||||| || || | |||||||| ||||||
Sbjct 14225 TGGAGACCCTCGTCTCGGGAGATCAACTCGTTGCTGAAGGTCAAGCCGGGCATGAGGCCA 14284
Query 24210 CGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCC 24269
||||| || |||||||| ||||| ||||| || || ||||| |||||||||||
Sbjct 14285 CGCTTCTTCAGCCAAAAGATGGAGGCAAAACTGCCGGAGAAGAAGATTCCTTCTACGCAA 14344
Query 24270 GCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTC-ATG--TATCCACTTTTGAGCC 24326
|| ||||| | | | || || | ||| |||| || ||||||| | |||
Sbjct 14345 GCGAAGGCCACCACACGCTCCCCGAAGGTGGCCGTGTCGCTGCCGATCCACTGCAGGGCC 14404
Query 24327 CAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376
|| || |||||||| || ||||| || | ||||| | ||| || || ||
Sbjct 14405 CAGTCTGCCTTCTTCTTCACACACGGTAGGGTCTCCACAGCGTTGAAAAG 14454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593210747092320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |