Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq15718 122 1e-22 seq35 86.0 7e-12 >seq15718 Length=23337 Score = 122 bits (134), Expect = 1e-22 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 145765 GCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATG 145824 |||| ||| | ||||||||||| ||| ||| |||||||| || || ||||| |||||| Sbjct 3075 GCGATCATATGAGTCAGCAGGGAATAGGAGGCGATGTTGAAAGGGACTCCCAGGCCCATG 3134 Query 145825 TCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCAC 145884 || | ||||||||| ||||| ||||| || ||| |||||||||||||||| | Sbjct 3135 TCGGCGCTGCGCTGGTAGAGCTGACAGGACAGGCGCCCCTCCGCCACGTAGAACTGCACC 3194 Query 145885 AGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCA 145934 ||| |||||| || ||||||||||| ||||| | || || || ||| Sbjct 3195 AGGCAGTGGCACGGGGGCAGGGCCATCAGGGGCAAGGCCTGCGCGTCCCA 3244 >seq35 Length=455554 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838 |||||| | ||||||||| || ||||| |||| || || || || | |||||||| Sbjct 112679 CAGCAGTGCGTAGCTGGCGATATTGAACGGCAAGCCGAGGAAGATATCGCATGAGCGCTG 112620 Query 145839 GTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGG 145898 ||||||||||||||| | | ||| | ||||| ||||||||| | | |||||| || Sbjct 112619 GTACAGCTGGCAGGACAATTTACCGTCGGCCACATAGAACTGGAAGAAAGCGTGGCAAGG 112560 Query 145899 CGGCAGGGCCAT 145910 | ||| ||||| Sbjct 112559 TGCCAGCGCCAT 112548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589569083169360