Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq6691 300 2e-76
seq223 208 8e-49
seq8056 122 9e-23
seq4062 118 1e-21
seq8521 107 2e-18
seq15643 105 7e-18
seq48539 84.2 2e-11
>seq6691
Length=42033
Score = 300 bits (332), Expect = 2e-76
Identities = 335/445 (75%), Gaps = 2/445 (0%)
Strand=Plus/Minus
Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007
|| ||||| | ||||| | ||||| || || ||||||| || ||||| |||| |||
Sbjct 14451 TTCAACGCTGTGGAGACCCTACCGTGTGTGAAGAAGAAGGCAGACTGGGCCCTGCAGTGG 14392
Query 117008 ATCGCCGGCAGAGA-GGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGG 117066
|||| | || || | |||| ||||||| ||||| ||||||||||||| ||| || ||
Sbjct 14391 ATCGGCAGC-GACACGGCCACCTTCGGGGAGCGTGTGGTGGCCTTCGCTTGCGTAGAAGG 14333
Query 117067 CGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCC 117126
||||||| || |||||||| ||| |||| |||||||| ||||| || |||||||||||
Sbjct 14332 AATCTTCTTCTCCGGCAGTTTTGCCTCCATCTTTTGGCTGAAGAAGCGTGGCCTCATGCC 14273
Query 117127 CGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGC 117186
|||| |||| |||||||||||| | |||||| | ||||||||||| || |||||||||||
Sbjct 14272 CGGCTTGACCTTCAGCAACGAGTTGATCTCCCGAGACGAGGGTCTCCACTGCGACTTTGC 14213
Query 117187 CTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGT 117246
||| | ||||||| || || || ||| ||| ||| | || || ||| | |||||
Sbjct 14212 CTGCCTCATGTTCAAACACTTAGTACAGAAACCCAGCCCCGCACGAGTCCTAGCTATCGT 14153
Query 117247 CACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCT 117306
|| || || ||| ||| || || || |||||||| || ||||| || | || ||
Sbjct 14152 CAAGGATGCTGTCATCATTGAACAAGAGTTTCTCACCGACGCCCTGCCCGTCAGACTACT 14093
Query 117307 GGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCT 117366
||| | || ||||| ||||||||| || || || || || |||||| |||| || |
Sbjct 14092 GGGCATGAACTGCGACCTGATGTCGCAGTATATTGAATTTGTGGCCGACCGGCTCTTGGT 14033
Query 117367 CGAGCTGGTCGGCGCCAAGCACTAC 117391
|| |||| | | ||||||||||||
Sbjct 14032 GGACCTGGGCTGTGCCAAGCACTAC 14008
>seq223
Length=511576
Score = 208 bits (230), Expect = 8e-49
Identities = 356/514 (69%), Gaps = 2/514 (0%)
Strand=Plus/Plus
Query 65521 GCCCAGCAGCGGGTTGGCGCCCTTGCCGCCCGGAAACTCCCAGTCCACGTCCAGGCCGTC 65580
||||||| |||||| | || ||||||||||| |||||||| | |||| |||||
Sbjct 113473 GCCCAGCGCCGGGTTTTCACCGCCACCGCCCGGAAATTCCCAGTCAATATCCACACCGTC 113532
Query 65581 GAACAGCTTCCACGTCTGCAGAAACTcgcgcgccgactcgacgaacgcgcggcgcg-cgc 65639
|| | |||||| || ||||| || || |||| | ||||| || ||| |||
Sbjct 113533 AAAGAACTTCCAGGTTTGCAGGAATTCTTTTACCGAGGCTACGAAGACGTCCCGCTTCGC 113592
Query 65640 tcgcgTCGTGCATGTGATAAAACGGATCGGACAGGGTCCAGCCGCCGATGGAGGGCAGCA 65699
| || | |||| ||| ||||| || |||| |||||||| |||||||| || | |
Sbjct 113593 -CTTATCCTTCATGAAATAGAACGGGTCTGACAACGTCCAGCCACCGATGGAAGGGACAA 113651
Query 65700 CGCGCAGGTGCGGGTGCGCCTTCTTGATGGCCATCAGCTGGCCGAAGTTGCCCTTGTACG 65759
||||| || | || || || | ||||||||||| || || || || || || |
Sbjct 113652 TTTTCAGGTTTGGATAGGCTTTTTTCAGCGCCATCAGCTGACCAAAATTACCTTTATAAG 113711
Query 65760 GCTCGCTCCACGCGGTCACGCCCTTTTGCGGCTTCTGCACGGCCGCCCACGGGTCGTGCA 65819
| | | | | ||||| | || ||| ||||||| || ||||| || ||||| |
Sbjct 113712 GTGCTGAATATTCACTGACGCCTTGCTGAGGCATCTGCACCGCAGCCCAGGGATCGTGTA 113771
Query 65820 CCGCCAGCTTGAAGTCGTCGCGGCCCGCGCACGAGCGCTGCAGCGCCTCGAAGCTGCCCG 65879
||| | || || || | || ||||| || | ||| |||| |||| || ||||||
Sbjct 113772 TCGCAACTTTAAAATCCTGACGCCCCGCACAGGCGCGTTGCAAGGCCTGAAAACTGCCCT 113831
Query 65880 CGATGGACTTGAGGCTGTCGTTGATGCCGTCCCCGCCGCACATCGGCACGAAGCCGTACA 65939
| ||| || | |||||||| || |||||||||||||| |||||| |||||||||||
Sbjct 113832 CAATGCTTTTTAAACTGTCGTTAATCCCGTCCCCGCCGCAAATCGGCGTGAAGCCGTACA 113891
Query 65940 GCAGATGCGTGAGGTTGGGCACGGGCACCTTGTCGGCGGGAAAGTCGCGCCCGTACACGC 65999
| ||| || ||||| || | || | || || ||| || |||| || |||||||
Sbjct 113892 AGATATGTGTCAGGTTCTGCGCAGGGATTTTATCCACGGAGAATCCGCGACCATACACGC 113951
Query 66000 CCCACTCGACGAAGTAGGCGGCCACCACCTTGCC 66033
||||||| || || || ||| | || ||||||||
Sbjct 113952 CCCACTCAACAAAATATGCGCCAACGACCTTGCC 113985
>seq8056
Length=34938
Score = 122 bits (134), Expect = 9e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || ||||| || |||||| | || |||||| || |
Sbjct 32131 ATGCAGATCTTCGTCAAGACATTAACTGGCAAGACAATCACCCTGGAGGTCGAACCCTCA 32190
Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | ||||| |||||| ||||||| || || || ||||||||| | || ||
Sbjct 32191 GATACTATTGAAAACG-TCAAGGCCAAAATTCAAGATAAGGAAGGCATCCCCCCAGATCA 32249
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | | || | ||| ||||| |||||||| || | || |||||| |||||||||
Sbjct 32250 GCAGAGGTTGATTTTCGCTGGCAAGCAGCTGGAAGATGGACGTACCCTCTCCGACTACAA 32309
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||| ||||| || | || || ||||| || |||||
Sbjct 32310 CATTCAGAAAGAATCTACCCTTCATCTTGTATTGCG 32345
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| | || || || || ||||| | || || || || |
Sbjct 31903 ATGCAGATTTTCGTGAAAACTTTGACCGGAAAGACGATCACATTGGAGGTTGAGCCCTCA 31962
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | ||| | |||| ||||||| |||||||| || || || |||| ||
Sbjct 31963 GATACGATCGAAAATGTAAAGGCGAAAATTCAAGACAAAGAAGGAATTCCTCCGGATCAA 32022
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| || |||| ||| || ||||| | || || | |||||||| ||| |||||
Sbjct 32023 CAACGTCTTATCTTCGCTGGAAAACAATTAGAAGATGGTCGCACCCTTTCCGATTACAAT 32082
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| | || || ||| | |||
Sbjct 32083 ATCCAGAAGGAGTCGACCCTCCATTTGGTG 32112
>seq4062
Length=67394
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||||||||| || |||||| |||| || || | |
Sbjct 48164 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGCCTTCT 48223
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | || |||||| || || | || || || || |||||| | ||||||
Sbjct 48224 GACACCATCGAACATGTCAAGGCCAAGATCCAAGATAAGGAAGGAATCCCCCCAGACCAG 48283
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || |||| ||| ||||| |||||||| || | | || || |||||||||
Sbjct 48284 CAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCAGGACACTTTCGGACTACAAC 48343
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||||||||||| |||| || || || ||| ||
Sbjct 48344 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTG 48376
>seq8521
Length=40141
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| ||||| || | || || ||| || |
Sbjct 2247 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAGACCATTACACTGGAGGTTGAACCCTCG 2306
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
||||| | | | |||||| ||||| | ||||| || || |||||| | || |||
Sbjct 2307 GACAGTATTGAGAATGTCAAGGCCAAAATCCAGGACAAGGAAGGTATCCCCCCAGATCAG 2366
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || || || ||||| || || | ||||| ||| ||||||||||
Sbjct 2367 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAAC 2426
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| |||| || ||||| ||
Sbjct 2427 ATCCAGAAGGAGTCCACACTCCATCTTGT 2455
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || || || || |||||| |||| || || || ||
Sbjct 2475 ATGCAGATCTTCGTCAAGACTCTGACTGGGAAGACAATCACCCTCGAGGTTGAGCCCTCC 2534
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | |||| || || | ||||| || || || ||| | || |||
Sbjct 2535 GACACCATAGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAG 2594
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| ||| || || |||||||| || | || ||||| |||||||||
Sbjct 2595 CAGAGGTTGATCTTCGCCGGAAAGCAGCTGGAAGATGGACGTACCCTTTCTGACTACAAC 2654
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||| ||| | || || ||||| ||
Sbjct 2655 ATCCAGAAAGAGTCTACACTCCATCTCGT 2683
>seq15643
Length=27379
Score = 105 bits (116), Expect = 7e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || ||||| || || || ||||| |||||||||||| | || || || || |
Sbjct 12046 AATGCAGATTTTCGTGAAGACCCTTACGGGGAAAACCATCACCCTTGAGGTAGAGCCCTC 12105
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| |||| | || || | |||||||| || ||||| | || ||
Sbjct 12106 TGACACTATCGAAAATGTCAAAGCCAAGATCCAAGACAAAGAAGGAATCCCTCCAGATCA 12165
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | | |||| ||| || |||||||| || || | || ||||| || |||||
Sbjct 12166 GCAGAGGTTGATCTTCGCCGGAAAACAGCTCGAGGATGGACGTACCCTTTCAGATTACAA 12225
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| |||| || || |||||
Sbjct 12226 TATCCAGAAGGAGTCCACACTTCACTTAGTG 12256
>seq48539
Length=7100
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || || || || || || || ||||||||||||||| | || || ||| || |
Sbjct 6714 AATGCAGATTTTTGTCAAGACCCTTACTGGCAAAACCATCACCTTGGAAGTTGAACCCTC 6773
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | ||| | |||| || |||| ||||| || || || ||| | || ||
Sbjct 6774 AGATACCATTGAAAATGTTAAGGCTAAGATTCAAGACAAGGAAGGAATTCCCCCAGATCA 6833
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | | |||| || || || || |||| || | || ||||| ||||||||
Sbjct 6834 GCAGAGGTTGATCTTTGCAGGAAAGCAATTGGAAGATGGACGTACCCTTTCGGACTACAA 6893
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||| || |||||| | || || ||
Sbjct 6894 CATTCAAAAGGAGTCAACCCTTCA 6917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514775892519840
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