Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq223 120 3e-22
seq11224 107 2e-18
seq7028 105 8e-18
seq205 102 9e-17
seq68679 96.9 4e-15
seq28704 96.9 4e-15
seq7379 93.3 5e-14
seq44093 91.5 2e-13
seq18295 91.5 2e-13
seq14541 91.5 2e-13
seq3490 91.5 2e-13
seq1417 91.5 2e-13
seq1397 89.7 6e-13
>seq223
Length=511576
Score = 120 bits (132), Expect = 3e-22
Identities = 312/476 (66%), Gaps = 0/476 (0%)
Strand=Plus/Minus
Query 96463 GGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGACAAGGTGCCC 96522
|| || |||||||| || ||||||||||| | ||| || ||| ||| || | ||
Sbjct 113973 GGCGCATATTTTGTTGAGTGGGGCGTGTATGGTCGCGGATTCTCCGTGGATAAAATCCCT 113914
Query 96523 ATTCCCAATCTGACGCATCTATTGTACGGTTTTATACCCATTTGCGGAGGCGACGGTATC 96582
| || ||||| ||| | |||||||| || | || |||||||| || ||||| ||
Sbjct 113913 GCGCAGAACCTGACACATATCTTGTACGGCTTCACGCCGATTTGCGGCGGGGACGGGATT 113854
Query 96583 AACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCATGTGCCGGC 96642
||||||||| ||||| | ||| |||| |||| || ||| | ||||| ||
Sbjct 113853 AACGACAGTTTAAAAAGCATTGAGGGCAGTTTTCAGGCCTTGCAACGCGCCTGTGCGGGG 113794
Query 96643 AGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAACCGCAAAAA 96702
| | ||||| || ||| || ||||| | | ||| | || | || || ||
Sbjct 113793 CGTCAGGATTTTAAAGTTGCGATACACGATCCCTGGGCTGCGGTGCAGATGCCTCAGCAA 113734
Query 96703 GGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATGGCTATTCGC 96762
|| || ||||| | |||||| || |||||||| ||||| ||||| |
Sbjct 113733 GGCGTCAGTGAATATTCAGCACCTTATAAAGGTAATTTTGGTCAGCTGATGGCGCTGAAA 113674
Query 96763 AAACATAACCCTCATTTAAAAATTTTGCCTAGCATCGGTGGTTGGACACTGAGCGACCCT 96822
||| | || | | |||||| | ||| ||||||||| ||||| || |||||
Sbjct 113673 AAAGCCTATCCAAACCTGAAAATTGTCCCTTCCATCGGTGGCTGGACGTTGTCAGACCCG 113614
Query 96823 TTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACTCGGTTCGTGAATTC 96882
|||||||| | || | || || | || || || | |||||| ||||||
Sbjct 113613 TTCTATTTCATGAAGGATAAGGCGAAGCGGGACGTCTTCGTAGCCTCGGTAAAAGAATTC 113554
Query 96883 TTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGTTTCCCGGCGG 96938
||||| |||||||| || || || || || || |||||||| ||||| |||||
Sbjct 113553 CTGCAAACCTGGAAGTTCTTTGACGGTGTGGATATTGACTGGGAATTTCCGGGCGG 113498
>seq11224
Length=41968
Score = 107 bits (118), Expect = 2e-18
Identities = 73/82 (89%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 15869 AAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 15928
Query 60117 TCACCACTATACTACCGAGGAT 60138
| ||||||||||||||||||||
Sbjct 15929 TTACCACTATACTACCGAGGAT 15950
>seq7028
Length=60819
Score = 105 bits (116), Expect = 8e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 47122 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 47063
Query 60126 TACTACCGAGGAT 60138
|||||||||||||
Sbjct 47062 TACTACCGAGGAT 47050
>seq205
Length=216154
Score = 102 bits (112), Expect = 9e-17
Identities = 73/84 (87%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113
||| |||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |
Sbjct 118978 ATGCAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 118919
Query 60114 TACTCACCACTATACTACCGAGGA 60137
|||| ||||| |||||||||||||
Sbjct 118918 TACTTACCACCATACTACCGAGGA 118895
>seq68679
Length=32626
Score = 96.9 bits (106), Expect = 4e-15
Identities = 71/82 (87%), Gaps = 2/82 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||||| ||||| || ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 5845 AAAAATTCTCTCCA--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 5788
Query 60117 TCACCACTATACTACCGAGGAT 60138
| ||||||||||||| || |||
Sbjct 5787 TTACCACTATACTACTGAAGAT 5766
>seq28704
Length=14463
Score = 96.9 bits (106), Expect = 4e-15
Identities = 71/82 (87%), Gaps = 2/82 (2%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||||| ||||| || ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 4008 AAAAATTCTCTCCA--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 4065
Query 60117 TCACCACTATACTACCGAGGAT 60138
| ||||||||||||| || |||
Sbjct 4066 TTACCACTATACTACTGAAGAT 4087
>seq7379
Length=79682
Score = 93.3 bits (102), Expect = 5e-14
Identities = 74/88 (84%), Gaps = 1/88 (1%)
Strand=Plus/Plus
Query 60051 TTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 60110
|||| |||||| |||| | || ||||||||||||| |||||||||||||||||||||
Sbjct 41433 TTTA-GAAAAAAAATCTCTCCAGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 41491
Query 60111 ACATACTCACCACTATACTACCGAGGAT 60138
||||| ||||||||||||| || |||
Sbjct 41492 GGATACTTACCACTATACTACTGAAGAT 41519
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | ||||| || ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 19880 AAAAAATCTCTCCA--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 19823
Query 60117 TCACCACTATACTACCGAGGAT 60138
| ||||||||||||| || |||
Sbjct 19822 TTACCACTATACTACTGAAGAT 19801
>seq44093
Length=3230
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | ||||| || ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1427 AAAAAATCTCTCCA--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1370
Query 60117 TCACCACTATACTACCGAGGAT 60138
| ||||||||||||| || |||
Sbjct 1369 TTACCACTATACTACTGAAGAT 1348
>seq18295
Length=21712
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | ||||| || ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 81 AAAAAATCTCTCCA--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 24
Query 60117 TCACCACTATACTACCGAGGAT 60138
| ||||||||||||| || |||
Sbjct 23 TTACCACTATACTACTGAAGAT 2
>seq14541
Length=24660
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | ||||| || ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 6681 AAAAACTCTCTCCA--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 6738
Query 60117 TCACCACTATACTACCGAGGAT 60138
| ||||||||||||| || |||
Sbjct 6739 TTACCACTATACTACTGAAGAT 6760
>seq3490
Length=70237
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | ||||| || ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 44534 AAAAAATCTCTCCA--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 44591
Query 60117 TCACCACTATACTACCGAGGAT 60138
| ||||||||||||| || |||
Sbjct 44592 TTACCACTATACTACTGAAGAT 44613
Score = 89.7 bits (98), Expect = 6e-13
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACC 60132
|| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||
Sbjct 42756 GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACT 42815
Query 60133 GAGGATT 60139
|| ||||
Sbjct 42816 GAAGATT 42822
Score = 87.8 bits (96), Expect = 2e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACC 60132
|| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||
Sbjct 42983 GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACT 43042
Query 60133 GAGGAT 60138
|| |||
Sbjct 43043 GAAGAT 43048
Score = 87.8 bits (96), Expect = 2e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACC 60132
|| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||
Sbjct 50890 GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACT 50831
Query 60133 GAGGAT 60138
|| |||
Sbjct 50830 GAAGAT 50825
>seq1417
Length=110962
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | ||||| || ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 65782 AAAAAATCTCTCCA--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 65725
Query 60117 TCACCACTATACTACCGAGGAT 60138
| ||||||||||||| || |||
Sbjct 65724 TTACCACTATACTACTGAAGAT 65703
>seq1397
Length=119430
Score = 89.7 bits (98), Expect = 6e-13
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | ||||| || ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 31253 AAAAAATCTCTCCA--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 31310
Query 60117 TCACCACTATACTACCGAGGA 60137
| ||||||||||||| || ||
Sbjct 31311 TTACCACTATACTACTGAAGA 31331
Score = 87.8 bits (96), Expect = 2e-12
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | ||||| || || |||||||||| ||||||||||||||||||||| ||||
Sbjct 7946 AAAAAATCTCTCCA--GCGGGAAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 7889
Query 60117 TCACCACTATACTACCGAGGAT 60138
| ||||||||||||| || |||
Sbjct 7888 TTACCACTATACTACTGAAGAT 7867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571325593841520
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