Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq8056 98.7 1e-15
seq15643 86.0 9e-12
seq48539 84.2 3e-11
>seq8056
Length=34938
Score = 98.7 bits (108), Expect = 1e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128
|||||||| | || || || || ||||| ||||| ||||| || | | ||| |||
Sbjct 32111 ACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCGGAAAGGGTGCGACCATCTTCT 32052
Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|||||||||||||| || || | | ||| ||||||||||||||||||||||| |||||
Sbjct 32051 AATTGTTTTCCAGCGAAGATAAGACGTTGTTGATCCGGAGGAATTCCTTCTTTGTCTTG 31993
>seq15643
Length=27379
Score = 86.0 bits (94), Expect = 9e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155
||||| ||||||||||| || | | ||| || | |||||||| || || ||||| ||
Sbjct 12228 ATATTGTAATCTGAAAGGGTACGTCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTC 12169
Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|||||||| ||||| ||||||||||| |||||
Sbjct 12168 TGCTGATCTGGAGGGATTCCTTCTTTGTCTTG 12137
>seq48539
Length=7100
Score = 84.2 bits (92), Expect = 3e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128
||||| || | ||||||||||| ||||| || || ||||| || | | ||| ||
Sbjct 6695 ACCAAGTGAAGGGTAGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATCCTCC 6636
Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|| || ||||| || || ||||| || |||||||| ||||| |||||||| || |||||
Sbjct 6635 AACTGCTTTCCTGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCTTG 6577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 742886651297280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |