Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_002730.1
Length=38297
Score E
Sequences producing significant alignments: (Bits) Value
seq725 188 2e-43
>seq725
Length=236385
Score = 188 bits (208), Expect = 2e-43
Identities = 244/333 (73%), Gaps = 8/333 (2%)
Strand=Plus/Plus
Query 5174 CCCATTGGGGATTTAACAGTGTCTGCACCGTTGTTTTTTGTGGTGAAAAAGAACTGGTCA 5233
|| || ||||||||||| | |||| |||| | || |||||||| | || | ||
Sbjct 182744 CCAATCGGGGATTTAACCGGATCTGAGCCGTCGGATTGGGTGGTGAAGTAATACCGACCA 182803
Query 5234 TCACGGGTAAGG---GTGCGAAGAACTATAGTAAACATGCCTTCGACAGTGATTTTCTCG 5290
|| |||| | || | || ||||| | |||||||||||||||||||||||||||
Sbjct 182804 TCT---GTAACGCCCGTTCTCAGGGCTATACTGAACATGCCTTCGACAGTGATTTTCTCG 182860
Query 5291 TCCAGCATTTTGCCGATAGTTTTCATTTTCACGCGCCCCATAGGGGTTTCTTCGGTGTGT 5350
|| ||||| |||||||| |||||||| || | ||| ||| || || ||||| |||||
Sbjct 182861 TCGAGCATCTTGCCGATGGTTTTCATCTTGATGCGGCCCTGCGGTGTCTCTTCCGTGTGA 182920
Query 5351 GCAAGAAAATAGACTCTCAGGTCATCAGGTGCATCCTGTGCAGCCTTAATCACCTCCCAT 5410
|| || || || || |||| || || ||| |||| || || || || |||||
Sbjct 182921 GCCAGGAAGTAAACGATCAGCTCTTCTTCTGCCGCCTGGGCGGCGCGGATTACATCCCAG 182980
Query 5411 GCGTGGCGGCCTATCTCAGTAAATTTATCAAACGATTTTTCTTCTG-AGCGGCGCATAAA 5469
|| || ||| ||||| |||||||| ||||| ||||| || ||| ||| ||||||||
Sbjct 182981 GCACCGCCGCCAATCTCCGTAAATTTCTCAAAGGATTTCTC-GCTGCGGCGCCGCATAAA 183039
Query 5470 CTCATTGCTCATCACATACTGGAAGTCATCAAC 5502
|| ||| | |||||| |||||||| ||||||||
Sbjct 183040 CTGATTCCCCATCACGTACTGGAAATCATCAAC 183072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122328726239772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |