Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq6691 134 3e-26
>seq6691
Length=42033
Score = 134 bits (148), Expect = 3e-26
Identities = 285/422 (68%), Gaps = 5/422 (1%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| ||||| ||| || |||||||||||||| || || || ||||| || |||
Sbjct 14355 GTGGCCTTCGCTTGCGTAGAAGGAATCTTCTTCTCCGGCAGTTTTGCCTCCATCTTTTGG 14296
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| | || | |||| || | |||| | ||| ||||| || || | |||
Sbjct 14295 CTGAAGAAGCGTGGCCTCATGCCCGGCTTGACCTTCAGCAACGAGTTGATCTCCCGAGAC 14236
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATAC-CCC 102096
|| ||||| || |||||||||| ||| | |||| ||| | || || | | |||
Sbjct 14235 GAGGGTCTCCACTGCGACTTTGCCTGCCTCATGTTCAAACAC---TTAGTACAGAAACCC 14179
Query 102097 ATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156
| | | | | | || | || |||| || || ||| ||||||||||| |||||
Sbjct 14178 AGCCCC-GCACGAGTCCTAGCTATCGTCAAGGATGCTGTCATCATTGAACAAGAGTTTCT 14120
Query 102157 CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACAT 102216
||| | ||||||| || | | || |||| ||||||||| | ||||| ||||| ||
Sbjct 14119 CACCGACGCCCTGCCCGTCAGACTACTGGGCATGAACTGCGACCTGATGTCGCAGTATAT 14060
Query 102217 TGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTAC 102276
|||||||||||| || || ||||| || |||| | |||||||| |
Sbjct 14059 TGAATTTGTGGCCGACCGGCTCTTGGTGGACCTGGGCTGTGCCAAGCACTACGGATCCAA 14000
Query 102277 CAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAA 102336
||||||||| |||||||||| || ||||| || ||||||||||| || || ||
Sbjct 13999 GAACCCCTTCAGCTTCATGGACATGATCTCCCTGGAAGGCAAGACCAACTTCTTCGAGAA 13940
Query 102337 GA 102338
||
Sbjct 13939 GA 13938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 988711250616470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |