Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq6691 134 3e-26 >seq6691 Length=42033 Score = 134 bits (148), Expect = 3e-26 Identities = 285/422 (68%), Gaps = 5/422 (1%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||| ||| || |||||||||||||| || || || ||||| || ||| Sbjct 14355 GTGGCCTTCGCTTGCGTAGAAGGAATCTTCTTCTCCGGCAGTTTTGCCTCCATCTTTTGG 14296 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| | || | |||| || | |||| | ||| ||||| || || | ||| Sbjct 14295 CTGAAGAAGCGTGGCCTCATGCCCGGCTTGACCTTCAGCAACGAGTTGATCTCCCGAGAC 14236 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATAC-CCC 102096 || ||||| || |||||||||| ||| | |||| ||| | || || | | ||| Sbjct 14235 GAGGGTCTCCACTGCGACTTTGCCTGCCTCATGTTCAAACAC---TTAGTACAGAAACCC 14179 Query 102097 ATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156 | | | | | | || | || |||| || || ||| ||||||||||| ||||| Sbjct 14178 AGCCCC-GCACGAGTCCTAGCTATCGTCAAGGATGCTGTCATCATTGAACAAGAGTTTCT 14120 Query 102157 CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACAT 102216 ||| | ||||||| || | | || |||| ||||||||| | ||||| ||||| || Sbjct 14119 CACCGACGCCCTGCCCGTCAGACTACTGGGCATGAACTGCGACCTGATGTCGCAGTATAT 14060 Query 102217 TGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTAC 102276 |||||||||||| || || ||||| || |||| | |||||||| | Sbjct 14059 TGAATTTGTGGCCGACCGGCTCTTGGTGGACCTGGGCTGTGCCAAGCACTACGGATCCAA 14000 Query 102277 CAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAA 102336 ||||||||| |||||||||| || ||||| || ||||||||||| || || || Sbjct 13999 GAACCCCTTCAGCTTCATGGACATGATCTCCCTGGAAGGCAAGACCAACTTCTTCGAGAA 13940 Query 102337 GA 102338 || Sbjct 13939 GA 13938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988711250616470