Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq742 349 4e-91
seq6691 136 5e-27
>seq742
Length=196864
Score = 349 bits (386), Expect = 4e-91
Identities = 1182/1816 (65%), Gaps = 55/1816 (3%)
Strand=Plus/Minus
Query 62085 TAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG 62144
|| |||||||| || || | || | |||| || || || || ||| || || ||
Sbjct 48873 TAATACATTCCAGTCTTCAAGCCCATCTTCCAGCCATAGAAGTGGATAGAAGTGAGCTTT 48814
Query 62145 GAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCC 62204
|| | || ||||| | || || || | || |||||||| || || ||||||||
Sbjct 48813 CCGTAGTTGGGCTCTGCCACGTGTATGTTGAAGGACTGACTTTGGTCAATAAAGGCTCCT 48754
Query 62205 CTGTCTGCAGCCATTTTTATGATCGTCTTTTGT--GCAATTTCCCAAATAGTTTTATAAA 62262
| ||| || ||||| || || | || |||||| | ||||||||||| || || || |
Sbjct 48753 CGGTCGGCTGCCATCTTGATCA--GTATTTTGTTGGAAATTTCCCAAACTGTCTTGTAGA 48696
Query 62263 C-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATGGATCCACCATCTACCATAA 62319
|| || | ||| | | | | | || ||||||||||| | | || |
Sbjct 48695 GATCTCTGATGTGCTTGGGTATTCTGTCCAGGTTTTGAATGGATCCGTTGTTGGCAATGA 48636
Query 62320 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 62379
| ||| || || || || | ||| || | |||||| ||| | | || |||||
Sbjct 48635 TGAGATTTTTCATGTCGTCGTCCCACAAATCAGCCTCGGTCAAATCACGCAGTAGATGGT 48576
Query 62380 GGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 62439
| || || || ||||||||||||||||| || || | ||||| || || || | |
Sbjct 48575 GATTCACAACCTGGAATTCTCCAGACAAGACCCTTCTGGTGTAGATGTTGGAAGTGAAGG 48516
Query 62440 GTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62499
|||| | || || || ||||| ||||| || || || || || || ||||| ||||| |
Sbjct 48515 GTTCAAAGGATTCGTTGTTTCCTAAAATCTGGGCGGTGGAGGCGGTAGGCATGGGTGCGA 48456
Query 62500 CCAATAAACTATTTC-TAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTC 62558
|| | | | ||| | | |||| | | ||| ||| |||| | |||| |||
Sbjct 48455 G-AAGCAGCGAGTTCCTGACTCCGTGTATCGCGATCTTAGCTTTCAAGGCAGCCCAGTTC 48397
Query 62559 CAAAGATCCGACGG-------TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACT 62611
|| | ||| | || | | ||| |||||| ||||| || || ||
Sbjct 48396 CACAAATCTGTAGGCTTCTTGTCCCACATCTC-------ATATTGAAGAATCCCTTTGCT 48344
Query 62612 GGC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCG 62670
| | | || ||||| || || || |||| || |||||||| || || | ||||| |
Sbjct 48343 GACAGGAC-ATCCTGGGTACGTCTCGTATGTACCCTCCTTCTCGGCCAGCTCGCAACTTG 48285
Query 62671 CCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCG 62730
| || | ||||||||||| | || ||||| || | | ||| ||| || ||||
Sbjct 48284 CTTCCAGAGCACCGTAATACAATGTCTCAAATATTTGTTGATTCAGAAGCTGGGCTTTTT 48225
Query 62731 GGCTATCAAATGGATAAT----TTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCA 62786
|| ||||| || ||| |||||| || | || || || | ||||| | |||
Sbjct 48224 CACTCTCAAAAGGC-AATCTCATTAAGACAAAA---GCATCTGCCAGGCCTTGTATTCCA 48169
Query 62787 ATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTA 62846
|||||||| || | || | | | || || || ||||||||| | ||| ||| | |||
Sbjct 48168 ATACCGATGGGGCGGTGACGCATGTTCGATGTTCTAGCTTCTGGTACAGGGTAAAAGTTA 48109
Query 62847 ATATCTATAATTTTATTGAGATTT---CTGACAATTACTTTGACCACATCCTTCAGTTTG 62903
| || |||||||| || | |||| ||||| | ||| || |||||| ||
Sbjct 48108 ACGTCGATAATTTTGTTCAAATTTTTAGTGACAGT---CTTGGTTACGATCTTCAGCTTT 48052
Query 62904 AGAAAATCAAATCGCCCATCTAT-TACAAACATGTTCAATGCAACAGATGCCAGATTACA 62962
||| || ||| | || ||| ||||||||| || | || | ||| |||| ||| ||
Sbjct 48051 TCAAAGTCGAATACCTTAT-TATCTACAAACATATTGACAGCGATAGAGGCCAAATTGCA 47993
Query 62963 CACGGCTACCTCA--TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACAC 63020
|| ||||| ||| || | | | |||| | ||| || ||||| || ||||| |||
Sbjct 47992 GACAGCTACTTCATCTTTGGA--AGTGTATTCAACTATTTCTGTGCAGAGGTTACTGCAC 47935
Query 63021 TTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 63080
|| |||||||| | ||||||||| || |||||| ||| ||||| ||||| || || |||
Sbjct 47934 TTAATAGTTCCCAGATTTTGTTGGTTGCTCTTTCGGTTGCACGCGTCCTTGTACAGCATG 47875
Query 63081 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA-GACGACTCGAGCCTT 63139
| || || || ||||| | |||||||| || || || |||| | | || | |||||
Sbjct 47874 TAGGGGGTTCCCGTTTCTACTTGAGATTCGATGATGGCCATCCACAAAGTCT-GCGCCTT 47816
Query 63140 TATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTC 63199
|| | || | | | ||| |||||| | || |||| || || || ||
Sbjct 47815 GATCTTCTTCTTAGAACGACCTTCGGCTTCGTAGCGTGTGTACAGAGCCTCAAATTCTTC 47756
Query 63200 TCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTC 63259
|||||| | || || | ||| || | || ||||| | ||| || |||
Sbjct 47755 TCCCCAGCACTCGTGTAAGCCGGGAGCATCGTGGGGGCACATGAGACTCCAATCCTCGTT 47696
Query 63260 ATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTG 63318
|| || || ||||| || ||||| || ||||| | ||| || |||| || | ||
Sbjct 47695 GCTCTCGACACGCTTCATGAACAGATCGGGGATCCACA-AGCCGTAGAATAAGTCACGTG 47637
Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378
| | |||||| ||||| ||||||||||| | || | ||| | | || || | |
Sbjct 47636 CACGAACTTCCTCCTTTCCAGTATTCTTTTTCAAGTCTAAGAATTCAAATATGTCCGCGT 47577
Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438
||||||| || | ||| || || | | |||| |||| |||||||||||||| |||| |
Sbjct 47576 GCCACGGCTCAACGTAAATAGCGAAAGCTCCGGGCCTCTTGTTTCCTCCCTGGTCTACAT 47517
Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498
| | || |||||||| || || | || ||| || | | || || || | || || |
Sbjct 47516 AGCGGGCCGTGTTATTGTACACACGCAGCATGGGGACCAACCCATTGGAGACTCCGTTAG 47457
Query 63499 TACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCC 63556
|||| | ||| ||| || |||| || || | | || ||| || || || || ||
Sbjct 47456 TACCCGCGATGTAGGAACCCTTGGCTCGGATGCAGT-GTACATGA-AGGCCGATACCTCC 47399
Query 63557 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATC 63616
|| || || | | || || | || | ||||| ||||| ||||| || |||||
Sbjct 47398 AGCAGACTTGGAAACCAGGGCACACTGCTTCAGGGTGTCGTAGATCCCTTCAATACTATC 47339
Query 63617 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAA 63676
|||| ||||| ||||| || || ||||| || |||| | || | || ||
Sbjct 47338 ATCGCTCATGGCCAGTAGGAAGCAAGAAGACAGCTGAGGACGGGGCGTGGCTGCGGAGAA 47279
Query 63677 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63736
|| ||||| ||||| || || |||| || || || || ||||| || ||||| ||
Sbjct 47278 TAGAGTAGGGCTGGCGTGAGTGAAGTATTTCTCTGACAGAAGGTTGTAAGTTTCAATGGC 47219
Query 63737 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63796
||| || || || || || || || | || | ||| | |||||| || |||||
Sbjct 47218 TGAATCAATGTCTTCCCCGTGGATACCGACAGATACCCTCATGAGCATGTGTTGCGGTCT 47159
Query 63797 TTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63856
||| |||| ||| | || |||| || || || ||||| |||||||| |||||
Sbjct 47158 TTCTACAACTTTCCCTTCGATCTTCAGCAGATATGAGCGCTCCAAGGTTTTAAATCCAAA 47099
Query 63857 ATAGTTGTA--TGAAA 63870
||||| || |||||
Sbjct 47098 GTAGTTATAATTGAAA 47083
>seq6691
Length=42033
Score = 136 bits (150), Expect = 5e-27
Identities = 263/386 (68%), Gaps = 3/386 (1%)
Strand=Plus/Plus
Query 33417 TCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACT 33476
|| || || ||||| ||||| ||||| || || ||||| || | ||| | ||
Sbjct 14045 TCGGCCACAAATTCAATATACTGCGACATCAGGTCGCAGTTCATGCCCAGTAGTCTGACG 14104
Query 33477 GGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCTA 33536
|| || || | || ||||| |||||||||||| || |||| | | ||| |
Sbjct 14105 GGCAGGGCGTCGGTGAGAAACTCTTGTTCAATGATGACAGCATCCTTGACGATAGCTAGG 14164
Query 33537 ACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATCGCAG 33596
|| | | || ||| |||| ||| ||||| ||||| | || || || ||||||
Sbjct 14165 ACTCGTGCGGGGCTGGGTTTCTGTACTAAGTGTTTGAACATGAGGCAGGCAAAGTCGCAG 14224
Query 33597 TGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCA 33656
|| ||||||||||||| || || ||||| || || | |||||||| ||||||
Sbjct 14225 TGGAGACCCTCGTCTCGGGAGATCAACTCGTTGCTGAAGGTCAAGCCGGGCATGAGGCCA 14284
Query 33657 CGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCA 33716
||||| || |||||||| ||||| || || ||||| ||||||||||||||||| |
Sbjct 14285 CGCTTCTTCAGCCAAAAGATGGAGGCAAAACTGCCGGAGAAGAAGATTCCTTCTACGCAA 14344
Query 33717 GCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTC-ATG--TATCCACTTTTGAGCC 33773
|| ||||| | | | ||| || | ||| |||| || ||||||| | |||
Sbjct 14345 GCGAAGGCCACCACACGCTCCCCGAAGGTGGCCGTGTCGCTGCCGATCCACTGCAGGGCC 14404
Query 33774 CAATCGGCCTTCTTTTTTACACAAGG 33799
|| || |||||||| || ||||| ||
Sbjct 14405 CAGTCTGCCTTCTTCTTCACACACGG 14430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629275689191520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |