Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_003356.1
Length=42575
Score E
Sequences producing significant alignments: (Bits) Value
seq19589 145 2e-30
seq785 109 1e-19
>seq19589
Length=24186
Score = 145 bits (160), Expect = 2e-30
Identities = 173/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 16822 TGCGGCGTTATTTTTCTGTATCGGCTGCTGTTCCGTATACGGATGTCTGGATGTATAAGC 16881
||||||| ||| |||| || | ||| || | ||| || || ||||||||||||
Sbjct 18333 TGCGGCGGCCTTTCACTGTGACGAGTCTTGTACCATTTACTGACGTGTGGATGTATAAGT 18392
Query 16882 CTGTACAGTATTACCTCGGCAAACATCCCTGTGAAAAACCGGCGGAGATGTTGCGTCAGA 16941
| || | |||||| | ||| |||||||| || ||||| |||||||||||| || | | |
Sbjct 18393 CAGTTCCGTATTATCCCGGTAAACATCCGTGCGAAAAGCCGGCGGAGATGATGAGAGACA 18452
Query 16942 TAATTACCACCAGCAGTCGTCCGGGAGATCTGGTTGCAGATTTTTTCATGGGGTCGGGTT 17001
| || | | ||||||| || ||||| ||| | ||||| |||||||||||||| || ||||
Sbjct 18453 TCATCAACGCCAGCAGCCGACCGGGTGATGTAGTTGCTGATTTTTTCATGGGATCAGGTT 18512
Query 17002 CGACGGTCAAAGCAGCGATGGCGCTGGGACGTCGTGCAATTGGCGTTGAGCTGGA 17056
| ||| | |||| ||| || |||||| ||| || | ||||| || || ||
Sbjct 18513 CCACGATAAAAGAAGCAATCAAGCTGGGCCGTTTCGCGCTGGGCGTGGAACTTGA 18567
>seq785
Length=396209
Score = 109 bits (120), Expect = 1e-19
Identities = 86/99 (87%), Gaps = 3/99 (3%)
Strand=Plus/Minus
Query 17137 TACCGTTATTATCCTGCGCC-CGGCCCTTTAGCTAAGT-GGTGAGAGCGAGCGACTCATA 17194
|||||| || |||| || || ||||||||||||| ||| ||| ||||| ||||||||||
Sbjct 187992 TACCGT-ATAATCCCGCACCTCGGCCCTTTAGCTCAGTTGGTTAGAGCACGCGACTCATA 187934
Query 17195 ATCGCCAGGTCGCTGGTTCAAATCCAGCAAGGGCCACCA 17233
||||| |||||||||||||| |||||||||||||||||
Sbjct 187933 ATCGCTTGGTCGCTGGTTCAAGTCCAGCAAGGGCCACCA 187895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136007136309396
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |