Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq742 282 4e-71 >seq742 Length=196864 Score = 282 bits (312), Expect = 4e-71 Identities = 1176/1838 (64%), Gaps = 21/1838 (1%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||| ||||| | |||| |||| || | |||||||||| |||||||||||||| Sbjct 48918 TCAACGGTGAACTGGATAGCATTTACGGCAGGCTTTGTTCTCAAGTAATACATTCCAGTC 48859 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || | |||| |||| || || || || ||| || || ||| |||| | || | Sbjct 48858 TTCAAGCCCATCTTCCAGCCATAGAAGTGGATAGAAGTGAGCTTTCCGTAGTTGGGCTCT 48799 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCAT- 36968 | | | ||| | | || |||||||| || ||||| || |||| |||||||||||| Sbjct 48798 GCCACGTGTATGTTGAAGGACTGACTTTGGTCAATAAAGGCTCCTCGGTCGGCTGCCATC 48739 Query 36969 TTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATC 37028 || | || || ||| || || |||||||| || || || | | | | || | | Sbjct 48738 TTGATCAGTATTTTGTTG-GAAATTTCCCAAACTGTCTTGTAGAGATCTCTGATGTGCTT 48680 Query 37029 TGGTA---AATCTAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTC 37085 |||| || | | |||||| || || || | | || ||| || ||||| Sbjct 48679 GGGTATTCTGTCCAGGTTTTGAATGGATCCGTTGTTGGCAATGATGAGATTTTTCATGTC 48620 Query 37086 ATTATTCCACATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143 | | ||||| | || | | | | || | || ||| || |||| |||||||| Sbjct 48619 GTCGTCCCACAAA--TCAGCCTCGGTCAAATCACGCAGTAGATGGTGATTCACAACCTGG 48562 Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203 || |||||||| || || ||||| || || || ||| ||| | ||||||| ||| || Sbjct 48561 AATTCTCCAGACAAGACCCTTCTGGTGTAGATGTTGGAAGTGAAGGGTTCAAAGGATTCG 48502 Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTT 37263 || || | ||| || || | || || || |||||||| ||||| | || || || Sbjct 48501 TTGTTTCCTAAAATCTGGGCGGTGGAGGCGGTAGGCATGGGTGCGAGAAGCAGCGAGTTC 48442 Query 37264 CTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGG 37323 || | ||| ||| | || | ||| | || ||| | ||| |||||||| || Sbjct 48441 CTGACTCCGTGTATCGCGATCTTAGCTTTCAAGGCAGCCCAGTTCCACAAATCTGTAGGC 48382 Query 37324 TTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTC 37383 ||||| |||||| |||||||| ||||| ||||| || | ||| | | || ||| Sbjct 48381 TTCTTGTCCCACATCTCATATTGAAGAATCCCTTTGCTGACAGGACATCCTGGGTACGTC 48322 Query 37384 TCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATT 37443 || || | || | | | || || |||||||| | ||| || || | ||||| | | Sbjct 48321 TCGTATGTACCCTCCTTCTCGGCCAGCTCGCAACTTGCTTCCAGAGCACCGTAATACAAT 48262 Query 37444 GTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT 37503 || || || |||||| ||| | | | |||| ||| || || || | | | || | Sbjct 48261 GTCTCAAATATTTGTTGATTCAGAAGCTGGGCTTTTTCACTCTCAAAAGGCAATCTCATT 48202 Query 37504 AATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTA 37563 || | ||| |||| |||| || || | || ||||| ||||| | || | | || Sbjct 48201 AAGACAAAAGCATCTGCCAGGCCTTGTATTCCAATACCGATGGGGCGGTGACGCATGTTC 48142 Query 37564 GATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTA 37623 ||| | | |||| || || ||| | || | || || ||||| || | ||||||| Sbjct 48141 GATGTTCTAGCTTCTGGTACAGGGTAAAAGTTAACGTCGATAATTTTGTTCAAATTTTTA 48082 Query 37624 ACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTTATTATTAACAAAT 37683 | | || || | || ||| ||| || || ||||| ||||||| ||||| Sbjct 48081 GTGACAGTCTTGGTTACGATCTTCAGCTTTTCAAAGTCGAATACCTTATTATCTACAAAC 48022 Query 37684 TTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGT 37743 || | | | ||||| | | ||| || ||||| |||||||||| | | | ||| Sbjct 48021 ATATTGACAGCGATAGAGGCCAAATTGCAGACAGCTACTTCATCTTTGGAAGTGTATTCA 47962 Query 37744 ATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTT 37803 | || ||||| ||||| ||||| | |||| ||||||| ||| ||| ||| ||| Sbjct 47961 ACTATTTCTGTGCAGAGGTTACTGCACTTAATAGTTCCCAGATTTTGTTGGTTGCTCTTT 47902 Query 37804 TTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATA 37863 || || | || || || || || || || ||||| ||||| ||||| ||||| Sbjct 47901 CGGTTGCACGCGTCCTTGTACAGCATGTAGGGGGTTCCCGTTTCTACTTGAGATTCGATG 47842 Query 37864 ATAGATTTCCATAAACTTCTTGCTTTAACGATC-GCTT-TAAtttttttCTTTGTTTCGT 37921 || | |||| ||| | || || | || ||| || ||| | ||||| Sbjct 47841 ATGGCCATCCACAAAGTCTGCGCCTTGATCTTCTTCTTAGAACGACCTTC--GGCTTCGT 47784 Query 37922 ATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGC 37981 | | | || | | ||| || | ||||| ||| ||| || ||| ||| Sbjct 47783 AGCGTGTGTACAGAGCCTCAAATTCTTCTCCCCAGCACTCGTGTAAGCCGGGAGCATCGT 47724 Query 37982 ATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTA 38041 || ||||| ||| ||| || || | | || || || | ||| || | ||| || | Sbjct 47723 GGGGGCACATGAGACTCCAATCCTCGTTGCTCTCGACACGCTTCATGAACAGATCGGGGA 47664 Query 38042 CCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTT 38100 ||| || || ||| ||||| || | | | ||| || || || ||||||| | Sbjct 47663 TCCACAA-GCCGTAGAATAAGTCACGTGCACGAACTTCCTCCTTTCCAGTATTCTTTTTC 47605 Query 38101 AAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCT 38160 ||| || || || ||||| || |||||||| || || | ||||| | | ||||| Sbjct 47604 AAGTCTAAGAATTCAAATATGTCCGCGTGCCACGGCTCAACGTAAATAGCGAAAGCTCCG 47545 Query 38161 GGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATA 38220 || || || | |||||||| | | ||| | | |||||||| || | | | ||| Sbjct 47544 GGCCTCTTGTTTCCTCCCTGGTCTACATAGCGGGCCGTGTTATTGTACACACGCAGCATG 47485 Query 38221 GGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTAT- 38279 || || | ||||| || ||||| |||| | || || | |||||| ||||| || Sbjct 47484 GGGACCAACCCATTGGAGACTCCGTTAGTACCCGCGATGTAGGAACCCTTGGCTCGGATG 47425 Query 38280 -ATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTA 38338 | | || || | || || || || ||| || || | | || || || || | Sbjct 47424 CAGTGTACAT-GA-AGGCCGATACCTCCAGCAGACTTGGAAACCAGGGCACACTGCTTCA 47367 Query 38339 ACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACA 38398 || || | || ||||| ||||| ||||| | || | |||| || ||| ||||| Sbjct 47366 GGGTGTCGTAGATCCCTTCAATACTATCATCGCTCATGGCCAGTAGGAAGCAAGAAGACA 47307 Query 38399 TTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTT 38458 ||||| || || | ||| |||| ||||| || || |||| |||| | Sbjct 47306 GCTGAGGACGGGGCGTGGCTGCGGAGAATAGAGTAGGGCTGGCGTGAGTGAAGTATTTCT 47247 Query 38459 CCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAG 38518 | |||| | || || ||||| || | ||| || || | ||||| ||||| | || Sbjct 47246 CTGACAGAAGGTTGTAAGTTTCAATGGCTGAATCAATGTCTTCCCCGTGGATACCGACAG 47187 Query 38519 ATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGT-TTAAGTAGA 38577 |||||||||| ||||| ||||| |||||||||| | ||| ||| | || || ||| Sbjct 47186 ATACCCTCATGAGCATGTGTTGCGGTCTTTCTACAACTTT-CCCTTCGATCTTCAGCAGA 47128 Query 38578 TACGATTTTTCTAATGTTTTTATTCCAAAATAACTATA 38615 || || || || ||||| | |||||| || |||| Sbjct 47127 TATGAGCGCTCCAAGGTTTTAAATCCAAAGTAGTTATA 47090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468121669548960