Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq742 358 1e-93
seq6691 149 9e-31
>seq742
Length=196864
Score = 358 bits (396), Expect = 1e-93
Identities = 1181/1807 (65%), Gaps = 37/1807 (2%)
Strand=Plus/Minus
Query 78757 TAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTG 78816
|| |||||||| || || | || | |||| || ||||| || ||| || || ||
Sbjct 48873 TAATACATTCCAGTCTTCAAGCCCATCTTCCAGCCATAGAAGTGGATAGAAGTGAGCTTT 48814
Query 78817 GAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCC 78876
|| | || ||||| | || || || | || |||||||| || || ||||||||
Sbjct 48813 CCGTAGTTGGGCTCTGCCACGTGTATGTTGAAGGACTGACTTTGGTCAATAAAGGCTCCT 48754
Query 78877 CTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGG--AATTTCCCAAATAGTTTTATAAA 78934
| ||| || ||||| || || | || |||||| | ||||||||||| || || || |
Sbjct 48753 CGGTCGGCTGCCATCTTGATCA--GTATTTTGTTGGAAATTTCCCAAACTGTCTTGTAGA 48696
Query 78935 C-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATGGATCCACCATCTGCCATAA 78991
|| || | ||| | | | | | || ||||||||||| | || || |
Sbjct 48695 GATCTCTGATGTGCTTGGGTATTCTGTCCAGGTTTTGAATGGATCCGTTGTTGGCAATGA 48636
Query 78992 TCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 79051
| ||| || || || || | ||| || | |||||| ||| | | || |||||
Sbjct 48635 TGAGATTTTTCATGTCGTCGTCCCACAAATCAGCCTCGGTCAAATCACGCAGTAGATGGT 48576
Query 79052 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATG 79111
|||| || || || |||||||||||||| || || | ||||| || || || | |
Sbjct 48575 GATTCACAACCTGGAATTCTCCAGACAAGACCCTTCTGGTGTAGATGTTGGAAGTGAAGG 48516
Query 79112 GTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCA 79171
|||| | ||||| || ||||| ||||| || || || || || || ||||| ||||| |
Sbjct 48515 GTTCAAAGGATTCGTTGTTTCCTAAAATCTGGGCGGTGGAGGCGGTAGGCATGGGTGCGA 48456
Query 79172 CCAATAAACTATTTC-TAAGACCGTATGATCT-GATTTTATCTTTTAGAGATTCCCAATC 79229
|| | | | ||| | | |||| | ||| ||| ||| |||| | | |||| |
Sbjct 48455 G-AAGCAGCGAGTTCCTGACTCCGTGT-ATCGCGATCTTAGCTTTCAAGGCAGCCCAGTT 48398
Query 79230 CCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTA 79289
||| | ||| | || | ||| | |||||||| ||||| || || || |
Sbjct 48397 CCACAAATCTGTAGGCTTCTTGTCCCACATCTCATATTGAAGAATCCCTTTGCTGACAGG 48338
Query 79290 TGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAA 79349
|||||| ||| || || || | || ||||| ||||| | || ||||| || || |
Sbjct 48337 ACATCCTGGGTACGTCTCGTATGTACCCTCCTTCTCGGCCAGCTCGCAACTTGCTTCCAG 48278
Query 79350 TGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATC 79409
|| |||||||| | || || || || | | ||| ||| || |||| | || ||
Sbjct 48277 AGCACCGTAATACAATGTCTCAAATATTTGTTGATTCAGAAGCTGGGCTTTTTCACTCTC 48218
Query 79410 AAATGGATAAT----TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGA 79465
||| || ||| |||||| || | || ||||| | ||||| | ||||||||||
Sbjct 48217 AAAAGGC-AATCTCATTAAGACAAAA---GCATCTGCCAGGCCTTGTATTCCAATACCGA 48162
Query 79466 TAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTA 79525
| || | || | | | || || || ||||||||| | ||| ||| | |||| || |
Sbjct 48161 TGGGGCGGTGACGCATGTTCGATGTTCTAGCTTCTGGTACAGGGTAAAAGTTAACGTCGA 48102
Query 79526 TAATTTTATTGAGATTCCTGACTATTACT-TTGACCACATCCTTTAGTTTGAGAAAATCA 79584
||||||| || | ||| | | | | | ||| || ||| || || ||| ||
Sbjct 48101 TAATTTTGTTCAAATTTTT-AGTGACAGTCTTGGTTACGATCTTCAGCTTTTCAAAGTCG 48043
Query 79585 AATCGTCCATCTAT-TACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTAC 79643
||| || ||| ||||||||| || | |||| ||| |||| ||| || || |||||
Sbjct 48042 AATACCTTAT-TATCTACAAACATATTGACAGCGATAGAGGCCAAATTGCAGACAGCTAC 47984
Query 79644 CTCAT--TAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTT 79701
|||| | | | | |||| | |||||| |||||||||||||| |||||||| |||
Sbjct 47983 TTCATCTTTGGAAGTG--TATTCAACTATTTCTGTGCAGAGGTTACTGCACTTAATAGTT 47926
Query 79702 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTA 79761
|| | ||||||||| || |||||| ||| ||||| ||||| || || ||| | || ||
Sbjct 47925 CCCAGATTTTGTTGGTTGCTCTTTCGGTTGCACGCGTCCTTGTACAGCATGTAGGGGGTT 47866
Query 79762 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA-GACGACTCGAGCCTTTATTATAGA 79820
|| ||||| | |||||||| || || || |||| | | || | ||||| || |
Sbjct 47865 CCCGTTTCTACTTGAGATTCGATGATGGCCATCCACAAAGTCT-GCGCCTTGATCTTCTT 47807
Query 79821 CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAAC 79880
||| | | ||| |||||| |||| || | || || || ||||||||
Sbjct 47806 CTTAGAACGACCTTCGGCTTCGTAGCGTGTGTACAGAGCCTCAAATTCTTCTCCCCAGCA 47747
Query 79881 ATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTAC 79940
|||| ||| || ||| |||| || ||||| | ||| || | | || ||
Sbjct 47746 CTCGTGTAAGCCGGGAGCATCGTGGGGGCACATGAGACTCCAATCCTCGTTGCTCTCGAC 47687
Query 79941 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCT 79999
|| ||||| || ||||| || ||||| | ||| || |||| || | | | | |
Sbjct 47686 ACGCTTCATGAACAGATCGGGGATCCACA-AGCCGTAGAATAAGTCACGTGCACGAACTT 47628
Query 80000 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 80059
|||| ||||| ||||||||||| | || | ||| | | || || | |||||||| |
Sbjct 47627 CCTCCTTTCCAGTATTCTTTTTCAAGTCTAAGAATTCAAATATGTCCGCGTGCCACGGCT 47568
Query 80060 CCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 80119
| | ||| || || | | |||| || | |||||||||||||| |||| || | || |
Sbjct 47567 CAACGTAAATAGCGAAAGCTCCGGGCCTCTTGTTTCCTCCCTGGTCTACATAGCGGGCCG 47508
Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179
||||||| || || | || ||| || | | |||||||| || || || || | ||
Sbjct 47507 TGTTATTGTACACACGCAGCATGGGGACCAACCCATTGGAGACTCCGTTAGTACCCGCGA 47448
Query 80180 TATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 80237
| ||| || |||| || || | | || ||| || || || || || || ||
Sbjct 47447 TGTAGGAACCCTTGGCTCGGATGCAGT-GTACATGA-AGGCCGATACCTCCAGCAGACTT 47390
Query 80238 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCAT 80297
|| | | || || | || | || || ||||| || || || |||||||| ||||
Sbjct 47389 GGAAACCAGGGCACACTGCTTCAGGGTGTCGTAGATCCCTTCAATACTATCATCGCTCAT 47330
Query 80298 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 80357
| ||||| || || ||||| || |||| || | || |||| |||||
Sbjct 47329 GGCCAGTAGGAAGCAAGAAGACAGCTGAGGACGGGGCGTGGCTGCGGAGAATAGAGTAGG 47270
Query 80358 AGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT 80417
||||| || || |||| || ||||| || ||||| || ||||| ||||| || ||
Sbjct 47269 GCTGGCGTGAGTGAAGTATTTCTCTGACAGAAGGTTGTAAGTTTCAATGGCTGAATCAAT 47210
Query 80418 ATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 80477
|| || || || || | || | ||| | |||||| || |||||||| || |
Sbjct 47209 GTCTTCCCCGTGGATACCGACAGATACCCTCATGAGCATGTGTTGCGGTCTTTCTACAAC 47150
Query 80478 CTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 80537
|| | || |||| || || || ||||| |||||||| ||||| ||||| ||
Sbjct 47149 TTTCCCTTCGATCTTCAGCAGATATGAGCGCTCCAAGGTTTTAAATCCAAAGTAGTTATA 47090
Query 80538 --TGAAA 80542
|||||
Sbjct 47089 ATTGAAA 47083
>seq6691
Length=42033
Score = 149 bits (164), Expect = 9e-31
Identities = 266/386 (69%), Gaps = 3/386 (1%)
Strand=Plus/Plus
Query 49795 TCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 49854
|| || |||||||| ||||| ||||| || || ||||| || | ||| | ||
Sbjct 14045 TCGGCCACAAATTCAATATACTGCGACATCAGGTCGCAGTTCATGCCCAGTAGTCTGACG 14104
Query 49855 GGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA 49914
|| || || | || ||||| |||||||||||| || ||||| | | |||| |
Sbjct 14105 GGCAGGGCGTCGGTGAGAAACTCTTGTTCAATGATGACAGCATCCTTGACGATAGCTAGG 14164
Query 49915 ACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAG 49974
|| | | || ||| || | ||| ||||| ||||| | || || || ||||||
Sbjct 14165 ACTCGTGCGGGGCTGGGTTTCTGTACTAAGTGTTTGAACATGAGGCAGGCAAAGTCGCAG 14224
Query 49975 TGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCA 50034
|| ||||||||||||| || | |||||| || || | |||||||| ||||||
Sbjct 14225 TGGAGACCCTCGTCTCGGGAGATCAACTCGTTGCTGAAGGTCAAGCCGGGCATGAGGCCA 14284
Query 50035 CGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCG 50094
||||| || |||||||| ||||| ||||| || || |||||||||||||||||
Sbjct 14285 CGCTTCTTCAGCCAAAAGATGGAGGCAAAACTGCCGGAGAAGAAGATTCCTTCTACGCAA 14344
Query 50095 GCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTC-ATG--TATCCACTTTTGAGCC 50151
|| ||||| || | | ||| || | |||| |||| || ||||||| | |||
Sbjct 14345 GCGAAGGCCACCACACGCTCCCCGAAGGTGGCCGTGTCGCTGCCGATCCACTGCAGGGCC 14404
Query 50152 CAATCGGCCTTCTTTTTTACACAAGG 50177
|| || |||||||| || ||||| ||
Sbjct 14405 CAGTCTGCCTTCTTCTTCACACACGG 14430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 717650783567760
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