Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq742 316 3e-81
seq6691 125 1e-23
>seq742
Length=196864
Score = 316 bits (350), Expect = 3e-81
Identities = 1170/1809 (65%), Gaps = 41/1809 (2%)
Strand=Plus/Minus
Query 70840 TAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG 70899
|| ||||| || || || | || | |||| || || || || ||| || || ||
Sbjct 48873 TAATACATTCCAGTCTTCAAGCCCATCTTCCAGCCATAGAAGTGGATAGAAGTGAGCTTT 48814
Query 70900 GAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCC 70959
||| | || || || | ||| || || | ||||||||||| || || ||||||||
Sbjct 48813 CCGTAGTTGGGCTCTGCCACGTGTATGTTGAAGGACTGACTTTGGTCAATAAAGGCTCCT 48754
Query 70960 CTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGG--AATTTCCCAAATAGTTTTATAAA 71017
| ||| || ||||| || || | || |||||| | ||||||||||| || || || |
Sbjct 48753 CGGTCGGCTGCCATCTTGATCA--GTATTTTGTTGGAAATTTCCCAAACTGTCTTGTAGA 48696
Query 71018 C-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATGGATCCACCATCTGCAATAA 71074
|| || | ||| | | | | | || ||||||||||| | ||||| |
Sbjct 48695 GATCTCTGATGTGCTTGGGTATTCTGTCCAGGTTTTGAATGGATCCGTTGTTGGCAATGA 48636
Query 71075 TCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAG 71134
| |||||| || || || | ||| || | |||||| ||| | | || |||||
Sbjct 48635 TGAGATTTTTCATGTCGTCGTCCCACAAATCAGCCTCGGTCAAATCACGCAGTAGATGGT 48576
Query 71135 GATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACG 71194
|||| || || || |||||||||||||| || || | ||||| || || || | |
Sbjct 48575 GATTCACAACCTGGAATTCTCCAGACAAGACCCTTCTGGTGTAGATGTTGGAAGTGAAGG 48516
Query 71195 GTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 71254
|||| | || || || ||||| ||||| || || || || || || ||||| ||||| |
Sbjct 48515 GTTCAAAGGATTCGTTGTTTCCTAAAATCTGGGCGGTGGAGGCGGTAGGCATGGGTGCGA 48456
Query 71255 CCAATAGACTATTTCTAAGACCATGTGATCG-GATTTTATCTTTTAGAGATTCCCAATTC 71313
| || || || | || ||| |||| ||| ||| |||| | | |||| |||
Sbjct 48455 GAAGCAGCGAGTTCCTGACTCCGTGT-ATCGCGATCTTAGCTTTCAAGGCAGCCCAGTTC 48397
Query 71314 CAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTAT 71373
|| | ||| | || || || || || |
Sbjct 48396 CACAAATCTGTAGGCTTCTTGTCCCACATCTCATATTGAAGAATCCCTTTGCTGACAGGA 48337
Query 71374 GATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAAT 71433
|||||| || || ||||||| || || || ||||| || || ||||| || || |
Sbjct 48336 CATCCTGGGTACGTCTCGTATGTACCCTCCTTCTCGGCCAGCTCGCAACTTGCTTCCAGA 48277
Query 71434 GCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCA 71493
|| || ||||| | || || || || | | ||| ||| || |||| || |||
Sbjct 48276 GCACCGTAATACAATGTCTCAAATATTTGTTGATTCAGAAGCTGGGCTTTTTCACTCTCA 48217
Query 71494 AATGGATAAT----TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGAT 71549
|| || ||| |||||| || | || ||||| | ||||| | |||||||||||
Sbjct 48216 AAAGGC-AATCTCATTAAGACAAAA---GCATCTGCCAGGCCTTGTATTCCAATACCGAT 48161
Query 71550 AGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTAT 71609
|| | ||| | | | || || || ||||||||| | ||| ||| | |||| || ||
Sbjct 48160 GGGGCGGTGACGCATGTTCGATGTTCTAGCTTCTGGTACAGGGTAAAAGTTAACGTCGAT 48101
Query 71610 AATTTTATTGAGATTTCTGACTATTACT-TTGACCACATCCTTTAGTTTGAGAAAATCAA 71668
|||||| || | |||| | | | | | ||| || ||| || || ||| || |
Sbjct 48100 AATTTTGTTCAAATTTTT-AGTGACAGTCTTGGTTACGATCTTCAGCTTTTCAAAGTCGA 48042
Query 71669 ATCTCCCATCTAT-TACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACC 71727
|| | || ||| |||||||| || | || | ||| |||| ||| || || |||||
Sbjct 48041 ATACCTTAT-TATCTACAAACATATTGACAGCGATAGAGGCCAAATTGCAGACAGCTACT 47983
Query 71728 TCATTAGCATCGGCA---TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTT 71784
|||| | | || | |||| | ||||| ||||| || ||||| ||||| || |||
Sbjct 47982 TCAT---CTTTGGAAGTGTATTCAACTATTTCTGTGCAGAGGTTACTGCACTTAATAGTT 47926
Query 71785 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTA 71844
|| | ||||||||| || |||||| ||| ||||| ||||| || || || | || ||
Sbjct 47925 CCCAGATTTTGTTGGTTGCTCTTTCGGTTGCACGCGTCCTTGTACAGCATGTAGGGGGTT 47866
Query 71845 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATATT 71903
|| ||||| | |||||||| || || || |||| | | || | ||||| || | ||
Sbjct 47865 CCCGTTTCTACTTGAGATTCGATGATGGCCATCCACAA-AGTCTGCGCCTTGATCTTCTT 47807
Query 71904 CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGC 71963
||| | | ||| |||||| |||| || | || || || |||||||| ||
Sbjct 47806 CTTAGAACGACCTTCGGCTTCGTAGCGTGTGTACAGAGCCTCAAATTCTTCTCCCCA-GC 47748
Query 71964 ATT-GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTC-TCCATCATCATTT 72021
| | || ||| || ||| || | || ||||| | ||| || || | || |
Sbjct 47747 ACTCGTGTAAGCCGGGAGCATCGTGGGGGCACATGAGACTCCAATCCTCGTTGCTC-TCG 47689
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 72080
|| || ||||| || ||||| || ||||| | ||| || |||| || | | | |
Sbjct 47688 ACACGCTTCATGAACAGATCGGGGATCCACA-AGCCGTAGAATAAGTCACGTGCACGAAC 47630
Query 72081 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140
||||| ||||| ||||||||||| | || | ||| | | || || | ||||||||
Sbjct 47629 TTCCTCCTTTCCAGTATTCTTTTTCAAGTCTAAGAATTCAAATATGTCCGCGTGCCACGG 47570
Query 72141 TTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 72200
|| | ||| || || | | |||| |||| |||||||||||||| |||| || | ||
Sbjct 47569 CTCAACGTAAATAGCGAAAGCTCCGGGCCTCTTGTTTCCTCCCTGGTCTACATAGCGGGC 47510
Query 72201 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 72260
|||||||| || || | || ||| || | | |||||||| | || || || || |
Sbjct 47509 CGTGTTATTGTACACACGCAGCATGGGGACCAACCCATTGGAGACTCCGTTAGTACCCGC 47450
Query 72261 GATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATT 72318
||| ||| || |||| || || | || || ||| || || || || || ||
Sbjct 47449 GATGTAGGAACCCTTGGCTCGGATGCAGTG-TACATGA-AGGCCGATACCTCCAGCAGAC 47392
Query 72319 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 72378
|| || | | || || | || | || || ||||| || || ||||||||||| ||
Sbjct 47391 TTGGAAACCAGGGCACACTGCTTCAGGGTGTCGTAGATCCCTTCAATACTATCATCGCTC 47332
Query 72379 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 72438
||| ||||| || || ||||| || |||| || | || |||| |||
Sbjct 47331 ATGGCCAGTAGGAAGCAAGAAGACAGCTGAGGACGGGGCGTGGCTGCGGAGAATAGAGTA 47272
Query 72439 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 72498
|| ||||| || || |||| || ||||| || ||||| || ||||| ||||| ||
Sbjct 47271 GGGCTGGCGTGAGTGAAGTATTTCTCTGACAGAAGGTTGTAAGTTTCAATGGCTGAATCA 47212
Query 72499 ATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACG 72558
|| || || || || || | || | ||| | ||| || || |||||||| ||
Sbjct 47211 ATGTCTTCCCCGTGGATACCGACAGATACCCTCATGAGCATGTGTTGCGGTCTTTCTACA 47152
Query 72559 ATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 72618
| || | || |||| || || || ||||| |||||||| ||||| |||||
Sbjct 47151 ACTTTCCCTTCGATCTTCAGCAGATATGAGCGCTCCAAGGTTTTAAATCCAAAGTAGTTA 47092
Query 72619 TA--TGAAA 72625
|| |||||
Sbjct 47091 TAATTGAAA 47083
>seq6691
Length=42033
Score = 125 bits (138), Expect = 1e-23
Identities = 245/360 (68%), Gaps = 3/360 (1%)
Strand=Plus/Plus
Query 41926 CATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTG 41985
||||| || || ||||| || | ||| | || || || || | || ||||| |||||
Sbjct 14071 CATCAGGTCGCAGTTCATGCCCAGTAGTCTGACGGGCAGGGCGTCGGTGAGAAACTCTTG 14130
Query 41986 TTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAA 42045
|||||| ||| || || | | |||| | ||| | | || ||| | |
Sbjct 14131 TTCAATGATGACAGCATCCTTGACGATAGCTAGGACTCGTGCGGGGCTGGGTTTCTGTAC 14190
Query 42046 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAA 42105
||| ||||| ||||| | || || || |||||||| |||||||| |||| || ||
Sbjct 14191 TAAGTGTTTGAACATGAGGCAGGCAAAGTCGCAGTGGAGACCCTCGTCTCGGGAGATCAA 14250
Query 42106 TTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGC 42165
|||||| || || | |||||||| ||||||||||| || |||||||| || || ||
Sbjct 14251 CTCGTTGCTGAAGGTCAAGCCGGGCATGAGGCCACGCTTCTTCAGCCAAAAGATGGAGGC 14310
Query 42166 AAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA 42225
||| || || ||||||||||||||||| || ||||| | | | ||| || |
Sbjct 14311 AAAACTGCCGGAGAAGAAGATTCCTTCTACGCAAGCGAAGGCCACCACACGCTCCCCGAA 14370
Query 42226 ACCGGCACTGTC-ATG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 42282
||| |||| || ||||||| | ||||| || |||||||| || ||||| ||
Sbjct 14371 GGTGGCCGTGTCGCTGCCGATCCACTGCAGGGCCCAGTCTGCCTTCTTCTTCACACACGG 14430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670561735053840
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