Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_004313.1 Length=40149 Score E Sequences producing significant alignments: (Bits) Value seq19589 84.2 6e-12 >seq19589 Length=24186 Score = 84.2 bits (92), Expect = 6e-12 Identities = 120/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 35199 CCGAAACGCCGTCGATGGGTCAATGAGAGATATACCCGCTGGGGTTAAATC-CCAGCCGT 35257 ||||| ||||| || | | || || ||| |||| |||| |||| | |||||| | Sbjct 14800 CCGAAGCGCCGCCGGTACGAAAACACGAAATACACCCAATGGG--TAAAGCGCCAGCCAT 14857 Query 35258 GCGCCTGCTGCGGGAAGCAGGCGGATGATCCGCACCACCTGATAGGCCACGGTCAGGGAG 35317 || | |||| || || | | ||||||||||||||| | | ||| | ||| || | Sbjct 14858 GCTGCGGCTGTGGCAACGGGTCTGATGATCCGCACCACATCACTGGCAATGGTTTTGGCG 14917 Query 35318 GGATGGGAACAAAGGCGCATGACCTCTTTGTGCTGCCGTTGTGCAGA 35364 | |||| |||||| ||||||||||| || ||| | ||| |||||||| Sbjct 14918 GTATGGCAACAAAAGCGCATGACCTGTTCGTGATCCCGCTGTGCAGA 14964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128250281978188