Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq19589 100 1e-16 >seq19589 Length=24186 Score = 100 bits (110), Expect = 1e-16 Identities = 221/331 (67%), Gaps = 3/331 (1%) Strand=Plus/Plus Query 15014 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 15073 |||| ||| ||||||| |||||| | | || ||| |||||| |||||||||| | Sbjct 12366 ACAAAGACCGCTGGCAGACGCCGATGGAAGTATTCACTGCGCTGGATCTTGAGTTTGGTT 12425 Query 15074 TCTGGCTGGATTCAGCTGCGAGCGACAAAAATGCTCTGTGCGCTCACTGGCTAACTGAGG 15133 | | || || | |||| | || | || || || ||||| | | || || || | Sbjct 12426 TTTATCTTGACGCCGCTGA---CCACCAGAACGCGCTTTGCGCCCGGTACCTGACAGAAG 12482 Query 15134 TCGACGACGCGCTCAATTCTGAGTGGGTAAGCCACGGTGCAATCTGGAATAACCCACCGT 15193 ||| || ||||| | || |||| || |||| ||||||||| |||||| || | Sbjct 12483 CCGATGATGCGCTGGCCACCGAATGGGAGAGTTACGGCGCAATCTGGTGTAACCCGCCAT 12542 Query 15194 ACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGACAGA 15253 ||||| |||| ||||||||| || || ||||| ||||| ||| ||| ||| Sbjct 12543 ACAGCTCGATCACGCCGTGGGTTGAGAAGGCCGCCGAGCAATGCCGCGCCCAGTACCAGC 12602 Query 15254 CGGTAGTTATGCTTGTACCAGAGGATATGTCAGTCGGATGGTTCAGCAAGGCTCTGGAGA 15313 |||| || ||||| | || | |||| ||| || |||||| ||| ||| | Sbjct 12603 CGGTGGTAATGCTGCTGCCCGCCGATACCTCAACAGGCTGGTTCTCGCTGGCGCTGACTA 12662 Query 15314 GTGTTGACGAAGTTCGTATTATCACTGATGG 15344 | |||||| | || ||||||||||||| Sbjct 12663 CAGCCGACGAAATCCGCTTTATCACTGATGG 12693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185102972358736