Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_004913.3 Length=59866 Score E Sequences producing significant alignments: (Bits) Value seq19589 95.1 5e-15 >seq19589 Length=24186 Score = 95.1 bits (104), Expect = 5e-15 Identities = 220/331 (66%), Gaps = 3/331 (1%) Strand=Plus/Plus Query 48354 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 48413 |||| ||| ||||||| |||||| | | || ||| |||||| |||||||||| | Sbjct 12366 ACAAAGACCGCTGGCAGACGCCGATGGAAGTATTCACTGCGCTGGATCTTGAGTTTGGTT 12425 Query 48414 TCTGGCTGGATTCAGCTGCGAGCGACAAAAACGCTCTGTGTGCTCACTGGCTAACTGAGG 48473 | | || || | |||| | || | ||||| || || || | | || || || | Sbjct 12426 TTTATCTTGACGCCGCTGA---CCACCAGAACGCGCTTTGCGCCCGGTACCTGACAGAAG 12482 Query 48474 CTGACGACGCGCTAAATTCTGAGTGGATAAGCCACGGTGCAATCTGGAATAACCCACCGT 48533 | || || ||||| | || ||| || |||| ||||||||| |||||| || | Sbjct 12483 CCGATGATGCGCTGGCCACCGAATGGGAGAGTTACGGCGCAATCTGGTGTAACCCGCCAT 12542 Query 48534 ACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGACAGA 48593 ||||| |||| ||||||||| || || ||||| ||||| ||| ||| ||| Sbjct 12543 ACAGCTCGATCACGCCGTGGGTTGAGAAGGCCGCCGAGCAATGCCGCGCCCAGTACCAGC 12602 Query 48594 CGGTAGTGATGCTTGTGCCAGAGGATATGTCTGTCGGATGGTTCAGCAAGGCTCTGGAGA 48653 |||| || ||||| |||| | |||| || || |||||| ||| ||| | Sbjct 12603 CGGTGGTAATGCTGCTGCCCGCCGATACCTCAACAGGCTGGTTCTCGCTGGCGCTGACTA 12662 Query 48654 GTGTTGACGAAGTTCGCATCATCACTGATGG 48684 | |||||| | ||| | ||||||||||| Sbjct 12663 CAGCCGACGAAATCCGCTTTATCACTGATGG 12693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191293108379024