Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_005066.1 Length=164018 Score E Sequences producing significant alignments: (Bits) Value seq828 125 7e-24 >seq828 Length=218660 Score = 125 bits (138), Expect = 7e-24 Identities = 134/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 53628 TTCGGTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGACTATTGAAGCG 53687 ||| || || ||||| | || |||||||||||||| || | |||||| ||||| || Sbjct 42140 TTCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCAGTGAGTTGAAACG 42199 Query 53688 CACCGCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGATGTTCAACAGC 53747 ||||| || ||||| || ||||| || ||||| ||||| ||||||||||||| ||| || Sbjct 42200 TACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAGGATGTTTAACCGC 42259 Query 53748 GTCCAGCAACATTTCTCGTAACAATACGTTAATATTCAAATGCTGACCACCTTCAAC 53804 || || |||| || || |||||||| |||| |||||||||||||| || Sbjct 42260 ATCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGACCACCTTCCAC 42316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524278109533920