Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq8056 93.3 3e-14 seq8521 84.2 2e-11 >seq8056 Length=34938 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 ||||||||| || || ||| || || ||||| |||||| | || |||| || Sbjct 32112 CACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCGGAAAGGGTGCGACCATCTTC 32053 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 ||||||||||| || || || | ||||| || ||| |||| | |||||||| ||| Sbjct 32052 TAATTGTTTTCCAGCGAAGATAAGACGTTGTTGATCCGGAGGAATTCCTTCTTTGTCTTG 31993 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 |||||| || || | | | ||||||| ||||| || || | || || || || Sbjct 31992 AATTTTCGCCTTTACATTTTCGATCGTATCTGAGGGCTCAACCTCCAATGTGATCGTCTT 31933 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 ||||| ||||| ||||| || || |||||| Sbjct 31932 TCCGGTCAAAGTTTTCACGAAAATCTGCATG 31902 >seq8521 Length=40141 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 ||||| || || || ||||||||| || || || ||| | ||| |||| ||| Sbjct 2911 ACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAGTCGGAAAGGGTACGTCCATCTTCC 2852 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 ||||| ||||||||||| ||||||| ||||| || | || | |||||| ||||| Sbjct 2851 AATTGCTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGGGATACCTTCCTTATCCTGG 2792 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || ||| || | ||| || |||| ||||| || || | || || || || Sbjct 2791 ATCTTGGCTTTCACATTCTCAATTGTGTCTGAGGGCTCAACCTCTAGGGTGATGGTCTTC 2732 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||| | || || ||||| || ||||| Sbjct 2731 CCGGTCAGGGTTTTGACAAAGATCTGCAT 2703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354479971971432