Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq8056 93.3 3e-14
seq8521 84.2 2e-11
>seq8056
Length=34938
Score = 93.3 bits (102), Expect = 3e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971
||||||||| || || ||| || || ||||| |||||| | || |||| ||
Sbjct 32112 CACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCGGAAAGGGTGCGACCATCTTC 32053
Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031
||||||||||| || || || | ||||| || ||| |||| | |||||||| |||
Sbjct 32052 TAATTGTTTTCCAGCGAAGATAAGACGTTGTTGATCCGGAGGAATTCCTTCTTTGTCTTG 31993
Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091
|||||| || || | | | ||||||| ||||| || || | || || || ||
Sbjct 31992 AATTTTCGCCTTTACATTTTCGATCGTATCTGAGGGCTCAACCTCCAATGTGATCGTCTT 31933
Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
||||| ||||| ||||| || || ||||||
Sbjct 31932 TCCGGTCAAAGTTTTCACGAAAATCTGCATG 31902
>seq8521
Length=40141
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972
||||| || || || ||||||||| || || || ||| | ||| |||| |||
Sbjct 2911 ACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAGTCGGAAAGGGTACGTCCATCTTCC 2852
Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032
||||| ||||||||||| ||||||| ||||| || | || | |||||| |||||
Sbjct 2851 AATTGCTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGGGATACCTTCCTTATCCTGG 2792
Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092
|| || ||| || | ||| || |||| ||||| || || | || || || ||
Sbjct 2791 ATCTTGGCTTTCACATTCTCAATTGTGTCTGAGGGCTCAACCTCTAGGGTGATGGTCTTC 2732
Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||||| | || || ||||| || |||||
Sbjct 2731 CCGGTCAGGGTTTTGACAAAGATCTGCAT 2703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354479971971432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |