Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_005083.2
Length=244834
Score E
Sequences producing significant alignments: (Bits) Value
seq785 149 1e-30
>seq785
Length=396209
Score = 149 bits (164), Expect = 1e-30
Identities = 555/857 (65%), Gaps = 26/857 (3%)
Strand=Plus/Minus
Query 7631 AAAGAAAATGCCAATAAAGACTCGAAAGTGATCCCTACAATGCGTGACTTGGTAGCTGGT 7690
|| || |||||||| |||||| ||||||||||| || ||||||| || | || |||
Sbjct 143153 AACGAGAATGCCAACAAAGACAGCAAAGTGATCCCGACCCAGCGTGACCTGCTGGCGGGT 143094
Query 7691 ACAGTGTCGAAACAATATGCACTGGAAGAATATCT-ACCGAAGCACAT--TGCAGACGCT 7747
| || | || || || || | || |||| | |||| | | ||| | |||
Sbjct 143093 ATTGTCGCCAAGCATTACGC-CAAACAGCATATTTTACCGCGTGATGTCGTGCTGGCGC- 143036
Query 7748 CAT-ATCGACGGCGATATTCATTTTCACGACCTTGATTATAGCCCACTATTCCCGCAATT 7806
|| | || ||||| || |||| ||| ||||| |||||| ||| | |||||| ||
Sbjct 143035 -ATGAGCGT-GGCGAAATCCATTATCATGACCTCGATTATTCCCCGTTCTTCCCGATGTT 142978
Query 7807 CAACTGTATGCTTATCGACATCAAGGGGATGTTCGAAGGTGGGTTCAAAATGGGTAACGC 7866
||||| ||||| |||||| | || || ||||| | || |||||||||||||| ||
Sbjct 142977 TAACTGCATGCTGATCGACCTTAAAGGCATGTTGAATCACGGTTTCAAAATGGGTAATGC 142918
Query 7867 TGAAATTGAAGAGCCAAATAGCATTGCGACTGCTGCGACTATCGTAACTCAGATCATTCA 7926
|||||||| |||||| ||| | || || || | || | ||||| ||
Sbjct 142917 GGAAATTGACACGCCAAAGTCTATTTCCACCGCAACGGCCGTCACCGCGCAGATTATCGC 142858
Query 7927 GCAAGTAAGCAGCCACATCTATGGCGGCAACACAATCAATCGCATCGACGAAGTGCTTGC 7986
||| || |||||| || || ||||||| || || || |||||||||||||| || ||
Sbjct 142857 GCAGGTCGCCAGCCATATTTACGGCGGCACGACCATTAACCGCATCGACGAAGTACTGGC 142798
Query 7987 TCCTTATGT--TCGCAAGTCGTACTACAAATGGTTAGAAATCGGTCGAGAAGAACATCCA 8044
|| | || ||| || | || | || || ||| | | | |||| |
Sbjct 142797 GCCGTTCGTCACCGCCAGCTTCAATAAACATCGTCAGA---CTGCC--GAAG-------A 142750
Query 8045 GATTCAGATT-CAAAAGCCGCGATCTTTGCTCGTAAACGTGTTGAGAAAGAAACGTATGA 8103
| |||||| || | || | |||||||| | ||| || ||||| |||||
Sbjct 142749 GTGGCAGATTGCAGATGCGGATGGCTTTGCTCACAGCCGTACCGAAAAAGAGTGTTATGA 142690
Query 8104 TGCGTTTCAGACTTTTGAATACCAAGTCAATACAATGCAGACTTCAAATGGTCAGACACC 8163
|| || ||| | | ||||| | || ||||| |||| || | || || ||||| ||
Sbjct 142689 CGCCTTCCAGTCGCTGGAATATGAGGTTAATACGCTGCACACCGCCAACGGCCAGACGCC 142630
Query 8164 ATTCACGACAATCAACTTCGGTTTAGGTACTTCGTGGGAAGAGAAACTGATTCAGAAAAG 8223
|| || || || || | || || || |||||| | ||||| ||| ||
Sbjct 142629 GTTTGTCACCTTCGGTTTTGGCCTCGGCACATCCTGGGAATCGCGCCTGATCCAGCAATC 142570
Query 8224 CATTCTGCAAAATCGTATTGCTGGTCTAGGCAAGACTAAGAAAACTGCTATCTTCCCGAA 8283
||||||| || || ||||| || || ||||| | | ||||| ||| | ||||| ||
Sbjct 142569 AATTCTGCGTAACCGCATTGCCGGACTGGGCAAAAATCGCAAAACCGCTGTATTCCCAAA 142510
Query 8284 ACTTGTTTTCACGTTGAAAGACGGTGTTAACTTGAAAGAAGGTGATCCTTGTTACGGAAT 8343
||| || || | | ||||| | || |||| ||||| | |||| ||
Sbjct 142509 ACTGGTGTTTGCCATCCGTGACGGCCTGAATCATAAAGCCGGTGACGCCAACTACGACAT 142450
Query 8344 CAAGAAGCTTGCTCTTGAGTGTGCAAGTAAACGCATGTACCCAGACATTTTGAACTATGA 8403
|||| | || || || || || || || || || |||||||| ||||| | || |||||
Sbjct 142449 CAAGCAACTGGCACTGGAATGCGCCAGCAAGCGTATGTACCCGGACATCCTCAATTATGA 142390
Query 8404 AAAGCTAGTTGAAACAACTGGCGGATTCAAGTCGCCTATGGGATGTCGTTCATTCTTGG- 8462
|| | || || || || ||||| |||| ||||| || || ||| |||
Sbjct 142389 TCAGGTGGTGAAAGTCACAGGTTCGTTCAAAACGCCGATGGGCTGCCGCAGTTTCCTGGG 142330
Query 8463 -GTGAATGGA-AAAATG 8477
||| ||| | ||||||
Sbjct 142329 CGTGTATGAAGAAAATG 142313
Score = 138 bits (152), Expect = 2e-27
Identities = 235/337 (70%), Gaps = 4/337 (1%)
Strand=Plus/Minus
Query 8894 TGGAAAGAACTGACTGGCTACGGATTCAGTCTATACAGCACGCCAAGCGAATCGCTATGT 8953
|||||||| || |||||||| ||||| || ||||||||||| |||||| || ||
Sbjct 141905 TGGAAAGACGAAACGGGCTACGGTTTCAGCCTGTACAGCACGCCGAGCGAAAACCTGTGC 141846
Query 8954 GATCGTTTCTGTCGTCTCGATCAAGAGAAATACGGTATCATTACGGGTATCAACGACAAA 9013
|| || ||||||||||| ||| ||| ||| ||| | | | ||| | | || |||
Sbjct 141845 GACCGCTTCTGTCGTCTGGATAAAGCCGAATTCGGGCTGGTGGCCGGTGTGACTGATAAA 141786
Query 9014 GACTATTACACGAACTCGTTTCACTTAGATGTGTTCAAGAAAGTGAATCCGTTCGAGAAG 9073
| || ||||| ||| || || | || || ||||| || ||||||| ||| ||
Sbjct 141785 GGTTACTACACCAACAGCTTCCATCTGGACGTCGAGAAGAAGGTAAATCCGTACGAAAAA 141726
Query 9074 ATTGATTTCGAA--GCAGCATACCCAATTCATGCGAATGGTGGTTTCATCTGCTATGCTG 9131
| || |||||| || | || | | | ||| || || || |||||||||||||||| |
Sbjct 141725 CTCGACTTCGAAGCGCCGTATCCGCCACTCA-GC-AACGGCGGTTTCATCTGCTATGGCG 141668
Query 9132 AATTCCCGAACATGCGAGACAACATCAAAGGTCTAGAGCGCGTATGGGATTACGCATATA 9191
||| ||| ||| ||| | |||| | |||| || || ||| ||||||||| ||||
Sbjct 141667 AATACCCTAACCTGCAACACAATCTGAAAGCGCTGGAAGACGTGTGGGATTACAGTTATA 141608
Query 9192 AGAAAGTTGCGTACTTCGGCACAAACACGCCGATTGA 9228
|| |||| | |||||| |||||||| || ||
Sbjct 141607 CCCGCGTGCCGTATTACGGCACCAACACGCCAATCGA 141571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 782666793992160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |