Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq18006 129 1e-25
>seq18006
Length=16927
Score = 129 bits (142), Expect = 1e-25
Identities = 275/404 (68%), Gaps = 10/404 (2%)
Strand=Plus/Plus
Query 5318 CCACATTTTC-GTCTTAAGTGTTCTATTGAAACGTTCACATATGGATGCTTTGAGATTGC 5376
|||||||| | || |||| |||||||||||||||||| ||| || ||||| | ||||
Sbjct 16289 CCACATTTCCTGTTTTAA-TGTTCTATTGAAACGTTCTACTATAGAAGCTTTCA--TTGC 16345
Query 5377 --TGAATGTTGAATACAGATTTATCTTGTGCTGCTTCATCAGATCTTTGAATTCTTTGTT 5434
|| | || ||||| |||| || || | ||||| | || | || | | ||
Sbjct 16346 ACTGTAAGTAGAATAATGATTAATTTTATAAGTTTTCATTAAATTCTGAAAATGAATATT 16405
Query 5435 GTAAAACTCTTTACCCTGATCAACATGGAGATTCTTAGGGATACGACCTTGCTGAAGTAC 5494
| || ||||| || ||||| || | ||| |||| || | |||||| | |
Sbjct 16406 AAAGAATTCTTTTCCTTGATCGGTTTGTAAATTTGTAGGTATCCTCTCTTGCTTTAAAAT 16465
Query 5495 AGACTTCATAGCACTTGTGACATCTACACCACTTTTAGACTTAATTGGAACTGCCCAGGC 5554
||||||||||| || | |||| || | |||||| ||||| | | |||||| ||
Sbjct 16466 TAACTTCATAGCATTTATTACATTATTACTAGATTTAGATTTAATCGATATTGCCCAAGC 16525
Query 5555 ATATTTTGAAAATATATCTATGATTGTAAGCAGATACTTGTATC--CTTTATTGACTGTT 5612
|||||| || |||| ||| || | ||| | || || || | | || | ||||| |
Sbjct 16526 ATATTTAGAGAATACATCAATAACTGTTAACAAGTATTTTTGGCCACTGTTTTGAC--GT 16583
Query 5613 GCATATGGAATCATCTCAACCAAGTCAGCTTGCCAAGTCTCATCGAGACCTCGGATATCA 5672
||||| || |||||||| || |||||||| |||||||| ||||| | || || | |
Sbjct 16584 GCATAAGGTATCATCTCTACTAAGTCAGCCTGCCAAGTATCATCCAATCCACGTTGAATA 16643
Query 5673 ACATGACGACGTTTATAGTTTCTACGAGCTGGTTTGTGAAGCTC 5716
|| | | || ||||||| |||| || ||||| || |||||
Sbjct 16644 ACCCGCCTTCGAGGATAGTTTTTACGTGCAGGTTTATGGAGCTC 16687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97894315358036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |