Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq828 107 2e-18 >seq828 Length=218660 Score = 107 bits (118), Expect = 2e-18 Identities = 138/189 (73%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 65588 TTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGC 65647 ||| ||| || |||||||| || || || ||||| || || || |||| ||| | || Sbjct 42131 TTACAGGCTTTCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCAGTGA 42190 Query 65648 ATTAAAGCGTACGGCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTTTTCTGGAT- 65706 || || ||||| |||||||| || ||||| || || ||||| || ||||| || |||| Sbjct 42191 GTTGAAACGTACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAGGATG 42250 Query 65707 --TAACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACC 65764 |||| ||||||||||| || | || || || || ||||| || |||||||| Sbjct 42251 TTTAACC---GCATCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGACC 42307 Query 65765 ACCTTCAAC 65773 |||||| || Sbjct 42308 ACCTTCCAC 42316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552877480728720