Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq223 167 2e-36 seq8056 89.7 5e-13 seq5095 89.7 5e-13 seq48539 82.4 7e-11 >seq223 Length=511576 Score = 167 bits (184), Expect = 2e-36 Identities = 328/485 (68%), Gaps = 0/485 (0%) Strand=Plus/Minus Query 62039 AAAGTCGTTGCCGCATATTTTGTCGAATGGGGCGTTTATCCTAGAAACTTTCCTGTAGAT 62098 || ||||||| |||||||||||| || |||||||| ||| | | || | || ||| Sbjct 113982 AAGGTCGTTGGCGCATATTTTGTTGAGTGGGGCGTGTATGGTCGCGGATTCTCCGTGGAT 113923 Query 62099 CGAGTGCCTACTCCTAATCTATCGCATGTTCTCTATGGATTTATTCCTATATGCGGCGGC 62158 | | ||| | | || || | ||| | | || || || | || || |||||||| Sbjct 113922 AAAATCCCTGCGCAGAACCTGACACATATCTTGTACGGCTTCACGCCGATTTGCGGCGGG 113863 Query 62159 GACGGCATTAACGACAGTCTCAAGACCATAACCGGTAGTTTTGAAGCTCTTCAGCGGTCG 62218 ||||| |||||||||||| | || | ||| || |||||| | || | || || | Sbjct 113862 GACGGGATTAACGACAGTTTAAAAAGCATTGAGGGCAGTTTTCAGGCCTTGCAACGCGCC 113803 Query 62219 TGTTCGGGTCGAGACGACTTTAAAGTGTCGATTCATGACCCGTGGGCTGCCGTCCAGAAA 62278 ||| |||| || | || |||||||| |||| || || || |||||||| || |||| Sbjct 113802 TGTGCGGGGCGTCAGGATTTTAAAGTTGCGATACACGATCCCTGGGCTGCGGTGCAGATG 113743 Query 62279 CCACAAAAACAAGTAACCGCTTGGAACGAACCATACAAAGGTAATTTTGGTCAATTGATG 62338 || || || || | | | | ||| || ||||||||||||||||| ||||| Sbjct 113742 CCTCAGCAAGGCGTCAGTGAATATTCAGCACCTTATAAAGGTAATTTTGGTCAGCTGATG 113683 Query 62339 GCAGCCAAACTGGCGAATCCTCACATTAAAGTGTTACCTTCGATAGGCGGCTGGACATTA 62398 || ||| || |||| || | ||| | | ||||| || || |||||||| || Sbjct 113682 GCGCTGAAAAAAGCCTATCCAAACCTGAAAATTGTCCCTTCCATCGGTGGCTGGACGTTG 113623 Query 62399 TCCGATCCGTTCTTTTATTTTCACGATGTGGCCAAACGCAAGATTTTTGTCGATTCCGTC 62458 || || ||||||| || | | ||| ||| || || | | || || | || || Sbjct 113622 TCAGACCCGTTCTATTTCATGAAGGATAAGGCGAAGCGGGACGTCTTCGTAGCCTCGGTA 113563 Query 62459 ATAGAATTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGATTGGGAGTTTCCC 62518 | |||||| | || |||||||| || || || ||||| || || || ||||| ||||| Sbjct 113562 AAAGAATTCCTGCAAACCTGGAAGTTCTTTGACGGTGTGGATATTGACTGGGAATTTCCG 113503 Query 62519 GGCGG 62523 ||||| Sbjct 113502 GGCGG 113498 >seq8056 Length=34938 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || ||||||||||| || | |||||| | || | ||| | Sbjct 32131 ATGCAGATCTTCGTCAAGACATTAACTGGCAAGACAATCACCCTGGAGGTCGAACCCTCA 32190 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | ||||| || ||| || || ||||| || || || ||||| Sbjct 32191 GATACTATTGAAAACGTCAAGGCCAAAATTCAAGATAAGGAAGGCATCCCCCCAGATCAG 32250 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | |||| || ||||| || || ||||||| | | | || |||||| ||| Sbjct 32251 CAGAGGTTGATTTTCGCTGGCAAGCAGCTGGAAGATGGACGTACCCTCTCCGACTACAAC 32310 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||||||||| | ||||| || || | || ||||||| Sbjct 32311 ATTCAGAAAGAATCTACCCTTCATCTTGTATTGCGTCTCCGAGGAGG 32357 >seq5095 Length=55463 Score = 89.7 bits (98), Expect = 5e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 70670 GGTGTTGTTTACTGGATGTCTCGCGATAGCAGAGTTCAAGACAATTGGGCCCTGATCTAC 70729 ||||||||||| ||||||||||| ||| ||||||||||||| ||||||||| || | | Sbjct 28221 GGTGTTGTTTATTGGATGTCTCGAGATTGCAGAGTTCAAGATAATTGGGCCATGTTGTTT 28280 Query 70730 GCTCAAGAACTGGC 70743 |||||| ||||||| Sbjct 28281 GCTCAAAAACTGGC 28294 >seq48539 Length=7100 Score = 82.4 bits (90), Expect = 7e-11 Identities = 158/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 26763 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA 26822 ||||| ||||| | || || ||||| || ||||| || |||| || | || | || Sbjct 6253 AACAACATGCAGATTTTCGTGAAAACCTTGACTGGCAAGACGATAACTTTGGAGGTGGAG 6312 Query 26823 TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882 | ||| || || || | || || ||| ||| ||||||||||| || ||||| Sbjct 6313 CCTTCCGATACGATTGAAAACGTGAAGGCAAAAATTCAAGACAAAGAAGGTATCCCTCCA 6372 Query 26883 GATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGAC 26942 ||||| || || || |||| || ||||| || | ||||| | ||| | || ||| Sbjct 6373 GATCAGCAGAGGCTGATTTTCGCTGGCAAGCAGTTGGAAGACGGCCGAACCCTCTCCGAT 6432 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || ||||| ||||| || |||| |||| || | || ||||||| Sbjct 6433 TACAATATCCAAAAGGAATCCACCCTCCACTTGGTGCTCCGTCTCCGAGGAGG 6485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478250546904480