Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq742 170 5e-37 >seq742 Length=196864 Score = 170 bits (188), Expect = 5e-37 Identities = 543/827 (66%), Gaps = 14/827 (2%) Strand=Plus/Plus Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502 |||| ||| | ||||| || ||| | ||| | || || | |||||||| | || Sbjct 47151 TTGTAGAAAGACCGCAACACATGCTCATGAGGGTATCTGTCGGTATCCACGGGGAAGACA 47210 Query 363503 TTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCAC 363560 ||||| | || |||||||| || || ||||| || | || ||||| ||||||| Sbjct 47211 TTGATTCAGCCATTGAAACTTACAACCTTCT--GTCAGAGAAATACTTCACTCACGCCAG 47268 Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAA 363620 || || | | | || | || | ||| ||| ||||||||||||| || || Sbjct 47269 CCCTACTCTATTCTCCGCAGCCACGCCCCGTCCTCAGCTGTCTTCTTGCTTCCTACTGGC 47328 Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTC 363680 |||| || ||| || || || |||| ||||| || ||| | ||||| || |||| Sbjct 47329 CATGAGCGATGATAGTATTGAAGGGATCTACGACACCCTGAAGCAGTGTGCCCTGGTTTC 47388 Query 363681 CAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACAGAACAGTTAC 363738 |||| ||| || || || || | || || ||| || | || || || ||| Sbjct 47389 CAAGTCTGCTGGAGGTATCGGCCT-TC-ATGTACACTGCATCCGAGCCAAGGGTTCCTAC 47446 Query 363739 ATTCGCGGC-ACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797 || ||||| || ||| ||| |||||| |||| |||||||| ||||||| | || Sbjct 47447 AT-CGCGGGTACTAACGGAGTCTCCAATGGGTTGGTCCCCATGCTGCGTGTGTACAATAA 47505 Query 363798 TACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCT 363857 || || | || || |||||||| ||| ||| | || || || ||||| || | Sbjct 47506 CACGGCCCGCTATGTAGACCAGGGAGGAAACAAGAGGCCCGGAGCTTTCGCTATTTACGT 47565 Query 363858 CGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGA 363917 ||||| || || || || ||||| || | || | || || || ||||| || Sbjct 47566 TGAGCCGTGGCACGCGGACATATTTGAATTCTTAGACTTGAAAAAGAATACTGGAAAGGA 47625 Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCG 363977 |||| | ||||||||||| | ||||| | | ||| | | || | || |||||||| Sbjct 47626 GGAAGTTCGTGCACGTGACTTATTCTACGGCTTGTGGATCCCCGATCTGTTCATGAAGCG 47685 Query 363978 CGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC-C 364035 || ||| ||| || ||||| ||| | ||||| ||||| ||| || ||| | | Sbjct 47686 TGTCGAGAGCA-ACGAGGATTGGAGTCTCATGTGCCCCCACGATGCTCCCGG-CTTACAC 47743 Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095 || ||||| || || | || ||||| ||| | || ||| | || || || Sbjct 47744 GAGTGCTGGGGAGAAGAATTTGAGGCTCTGTACACACGCTACGAAGCCGAAGGTCGTTCT 47803 Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155 |||| || || |||| | ||| | |||||||| || || || | || || Sbjct 47804 AAGAAGAAGATCAAGGCGCAGACTTTGTGGATGGCCATCATCGAATCTCAAGTAGAAACG 47863 Query 364156 GGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTT 364215 ||||| ||||| ||| ||||||| || |||||||||| ||| |||||| || | || Sbjct 47864 GGAACCCCCTACATGCTGTACAAGGACGCGTGCAACCGAAAGAGCAACCAACAAAATCTG 47923 Query 364216 GGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACAC 364262 || || ||| || || ||||| || || || || |||||||||| Sbjct 47924 GGAACTATTAAGTGCAGTAACCTCTGCACAGAAATAGTTGAATACAC 47970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302204126028188