Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq223 185 7e-42 seq18216 93.3 4e-14 >seq223 Length=511576 Score = 185 bits (204), Expect = 7e-42 Identities = 347/510 (68%), Gaps = 0/510 (0%) Strand=Plus/Minus Query 32164 CAAGACCGTCGCTGCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGA 32223 |||| ||| | || |||||||| || ||||||||||| || ||| ||| | | || Sbjct 113983 CAAGGTCGTTGGCGCATATTTTGTTGAGTGGGGCGTGTATGGTCGCGGATTCTCCGTGGA 113924 Query 32224 CAAAGTGCCGTTGCCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGG 32283 ||| | || || || || | ||| | |||||||| || | || ||||||||||| Sbjct 113923 TAAAATCCCTGCGCAGAACCTGACACATATCTTGTACGGCTTCACGCCGATTTGCGGCGG 113864 Query 32284 CGACGGACTAAACGATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTC 32343 ||||| | ||||| | |||| || |||||||||| |||| ||||||| | Sbjct 113863 GGACGGGATTAACGACAGTTTAAAAAGCATTGAGGGCAGTTTTCAGGCCTTGCAACGCGC 113804 Query 32344 GTGCAAAGGCCGCGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAA 32403 || || || || ||||| ||||| || ||||| || ||||| || | || | Sbjct 113803 CTGTGCGGGGCGTCAGGATTTTAAAGTTGCGATACACGATCCCTGGGCTGCGGTGCAGAT 113744 Query 32404 ACCGCAGAAGGGCGTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGAT 32463 || ||| | ||||| || | | ||| || ||||| || ||||| || |||| Sbjct 113743 GCCTCAGCAAGGCGTCAGTGAATATTCAGCACCTTATAAAGGTAATTTTGGTCAGCTGAT 113684 Query 32464 GGCGGCCAAGTTGGCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTT 32523 |||| || || | || || | |||||| | || || || || || |||||||| Sbjct 113683 GGCGCTGAAAAAAGCCTATCCAAACCTGAAAATTGTCCCTTCCATCGGTGGCTGGACGTT 113624 Query 32524 GTCGGATCCCTTTTATTTTATGCACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGT 32583 ||| || || || ||||| ||| | || || || ||| |||| || || | || || Sbjct 113623 GTCAGACCCGTTCTATTTCATGAAGGATAAGGCGAAGCGGGACGTCTTCGTAGCCTCGGT 113564 Query 32584 CAAAGAGTTTTTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCC 32643 ||||| || | || ||||| ||||||||||| ||||| ||||| ||||| || || Sbjct 113563 AAAAGAATTCCTGCAAACCTGGAAGTTCTTTGACGGTGTGGATATTGACTGGGAATTTCC 113504 Query 32644 GGGCGGCAAAGGTGCCAACCCGGCGCTCGG 32673 |||||| |||| ||||||||||| || Sbjct 113503 GGGCGGTGGCGGTGAAAACCCGGCGCTGGG 113474 >seq18216 Length=25005 Score = 93.3 bits (102), Expect = 4e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 112401 ACGTTGCCTAGGTCACCGACGTGTCGCTCGGCGGCGTCGGGTGCGCCATGG-TCTTGGTT 112459 || || || ||||| ||| | || ||||| || || | ||| || |||||| |||| || Sbjct 16575 ACATTTCCGAGGTCCCCGGCATGGCGCTCCGCCGCATTGGGAGCCCCATGGGTCTTC-TT 16517 Query 112460 CGTGGGGTTAAAATGCTCGCCCGCCGACGTGCACCCGTTGCTAGTGTCGCCAAACTCGTG 112519 |||||| ||||| || ||||| ||||| |||||| | |||| ||||||||||| Sbjct 16516 GAAGGGGTTGAAATGGGGCCCGGCCGAGGTGCAACCGTTGGTGTTGTCCCCAAACTCGTG 16457 Query 112520 CACGTGAAAACCGTG 112534 |||||| |||||||| Sbjct 16456 CACGTGGAAACCGTG 16442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424987172804080