Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_007805.1 Length=39199 Score E Sequences producing significant alignments: (Bits) Value seq9360 228 2e-55 >seq9360 Length=49093 Score = 228 bits (252), Expect = 2e-55 Identities = 357/508 (70%), Gaps = 2/508 (0%) Strand=Plus/Minus Query 5452 GAGCGCCAGGCTGATAACGCCTACAACGGCATGACGCTCCGCGAACTGGCCCGTGCCTCG 5511 || |||||| || |||| || ||||||||||| || |||||| || || ||| Sbjct 42296 GACCGCCAGAACGACAACGTGTATAACGGCATGACCCTGCGCGAATATGCGCGCATGTCG 42237 Query 5512 CTGGTCGATCGCGGGATCGGCGTGGCCTCGCTCAACGCGCCGCAAATGGTCGGCTTGGCC 5571 ||| ||| |||||| | ||||| || | ||| || ||| ||||| || |||| Sbjct 42236 CTGACCGAGCGCGGGGTGGGCGTTGCGGCTTATAACCCGATGCAGATGGTGGGACTGGCG 42177 Query 5572 TTCACCCACACTTCCAGCGACTTCGGCCTGATCCTTCTGGATGTCGCCAACAAGTCGGTG 5631 | || ||||| || || || ||| || || |||||||| || ||||| || | Sbjct 42176 ATGACGCACACCACCTCTGATTTTGGCAATATTCTGCTGGATGTGGCGAACAAATCTCTA 42117 Query 5632 CTGGCTGGCTGGGAAGAGGCCGAAGAAACCTTCCCGCTGTGGACCAAGTCCGGCATTCTC 5691 ||| |||||||||||| | | || || || ||||| ||| || ||| Sbjct 42116 CTGCAAGGCTGGGAAGAGTCACAGGAGACATTTGAAGCCTGGACGAAGAAAGGGCAGCTC 42057 Query 5692 ACTGACTTCAAGCCGGCGCGCCGCGTCGGGCTGGGCGAGTTTTCCTCGCTGCGTCAAGTG 5751 ||||||| || |||||| ||||||||||||||||| || | || |||||| | || Sbjct 42056 TCTGACTTTAAAACGGCGCACCGCGTCGGGCTGGGCGGCTTCCCGTCACTGCGTAAGGTA 41997 Query 5752 CGTGAGGGCGCCGAGTACAAGTACGTCACCCTCGGC-GAGCGCGGCGAGCAGATCATCCT 5810 || || || || || ||||| |||||||| || | || | | || || || Sbjct 41996 CGCGAAGGGGCGGAATACAAATACGTCACGA-CGACAGATAACAGTGAAACCATTGCGCT 41938 Query 5811 GGCCACCTACGGAGAGCTGTTCAGCATCACCCGTCAGGCGATCATCAACGACGACCTGCA 5870 |||||||||||| || | ||| ||| ||||||||||| || ||||||||||| ||| | Sbjct 41937 GGCCACCTACGGTGAAATTTTCTCCATTACCCGTCAGGCCATTATCAACGACGATCTGAA 41878 Query 5871 GATGCTCTCGGATATCCCGTTCAAGCTGGGCCAGGCTGCCAAGGCCACCATCGGCGACCT 5930 ||| | ||| ||||| | ||| |||||| || || || |||||||||||||| || Sbjct 41877 CCAGCTGACCGATGTCCCGATGAAGATGGGCCGCGCCGCAAAAGCCACCATCGGCGATCT 41818 Query 5931 GGTCTATGCGGTTCTGACCGGTAACCCG 5958 ||| ||||| || ||||||||||||||| Sbjct 41817 GGTGTATGCCGTGCTGACCGGTAACCCG 41790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125212766885588