Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_008348.1
Length=168041
Score E
Sequences producing significant alignments: (Bits) Value
seq223 196 5e-45
>seq223
Length=511576
Score = 196 bits (216), Expect = 5e-45
Identities = 449/661 (68%), Gaps = 15/661 (2%)
Strand=Plus/Plus
Query 51882 AGCATGTCGCGCAGCTCGGTCAAAAGCGTCACGTACGTCGCACCATCGCGATCGGGATCG 51941
||||| | ||||| || ||| ||| ||| || || ||||||| || || | | |
Sbjct 113417 AGCATCGCCCGCAGATCTTTCATCAGCTGCACATAGGTATCACCATC-CGC-CGTGCT-G 113473
Query 51942 CCCAGGTCGGGATTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCG 52001
||||| | || || | || ||||||||||| |||||||| | || || |||||
Sbjct 113474 CCCAGCGCCGGGTTTTCACCGCCACCGCCCGGAAATTCCCAGTCAATATCCACACCGTCA 113533
Query 52002 AAGAACTTCCAAGTCAGCAGAAACTCGCGAACCGATTCGACGAAG--GTTGCGCGTTTGC 52059
||||||||||| || |||| || || ||||| | |||||| || ||| || ||
Sbjct 113534 AAGAACTTCCAGGTTTGCAGGAATTCTTTTACCGAGGCTACGAAGACGTCCCGC-TTCGC 113592
Query 52060 TCGCGTCGTGCAGGAAGAAGAACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAGAA 52119
| || | || ||| ||||||| || |||| |||||| || ||||| || || | ||
Sbjct 113593 -CTTATCCTTCATGAAATAGAACGGGTCTGACAACGTCCAGCCACCGATGGAAGGGACAA 113651
Query 52120 TCTTGAGCGAAGGATTGGCCCGTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTACG 52179
| || || |||| ||| ||| |||||||||||| ||||| || || || || |
Sbjct 113652 TTTTCAGGTTTGGATAGGCTTTTTTCAGCGCCATCAGCTGACCAAAATTACCTTTATAAG 113711
Query 52180 GATCGTTCCAGGCCGAGACGCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAA 52239
| | | | |||||||| ||| || |||||| ||| |||||||||||||| |
Sbjct 113712 GTGCTGAATATTCACTGACGCCTTGCTGAGGCATCTGCACCGCAGCCCAGGGATCGTGTA 113771
Query 52240 TCGTCACCTTAAAGTCC-GACCTGCCCACGCAC--GACCGTTGCAACGCTTCGAAACTGT 52296
||| || ||||| ||| ||| |||| ||||| | |||||||| || | ||||||
Sbjct 113772 TCGCAACTTTAAAATCCTGAC--GCCC-CGCACAGGCGCGTTGCAAGGCCTGAAAACTGC 113828
Query 52297 TGTCGATCGGTTTCAGGCTGTCGTTGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGT 52356
|| || ||| | |||||||| || ||||| || ||||| || || |||||||||
Sbjct 113829 CCTCAATGCTTTTTAAACTGTCGTTAATCCCGTCCCCGCCGCAAATCGGCGTGAAGCCGT 113888
Query 52357 ACAGCAGATGCGACAGGTTCGGCAACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAA 52416
||| | ||| | ||||||| || || | ||| |||| || ||| || |
Sbjct 113889 ACAAGATATGTGTCAGGTTCTGCGCAGGGATTTTATCCACGGAGAATCCGCGACCATACA 113948
Query 52417 CGCCCCATTCGACAAAGTAGGCCGCTTTCACGGTGCCCGACGTGTCGACGTAGGGCAGAT 52476
||||||| || ||||| || || | || |||| ||| ||| | || ||| | |
Sbjct 113949 CGCCCCACTCAACAAAATATGCGCCAACGACCTTGCCAGACTTGTTGTTATAAGGCTGGT 114008
Query 52477 TGTTTTCGCGCCAC-TCGTAGTTGAGGGCGGCCAGATGGCTACCGTCCGTGTCGGCCACC 52535
| ||||| | | | | ||| | || | |||||| || ||||| || || ||||||
Sbjct 114009 TATTTTCCTTCAGCGTGCTGGTTAACGGTAG-CAGATGACTGCCGTCGGTATCTGCCACC 114067
Query 52536 A 52536
|
Sbjct 114068 A 114068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537140632766640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |