Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq223 190 1e-43 seq8056 86.0 4e-12 >seq223 Length=511576 Score = 190 bits (210), Expect = 1e-43 Identities = 346/504 (69%), Gaps = 2/504 (0%) Strand=Plus/Plus Query 84228 CCCAACGACGGGTTGGCTCCTTTGCCTCCCGGAAATTCCCAATCGATGTCTACACCGTCG 84287 |||| || |||||| | || || |||||||||||||| || || || |||||||| Sbjct 113474 CCCAGCGCCGGGTTTTCACCGCCACCGCCCGGAAATTCCCAGTCAATATCCACACCGTCA 113533 Query 84288 AAAAATTTCCATACTTGTAAAAACTCCTTAACCGAATTTACAAAAACGTTTCTTTTTTCA 84347 || || ||||| ||| | || || || ||||| ||| || |||| | || | Sbjct 113534 AAGAACTTCCAGGTTTGCAGGAATTCTTTTACCGAGGCTACGAAGACGTCCCGCTTCGCC 113593 Query 84348 ACATTGTGCATGAAATAAAACGGGTCCGACAACGTCCATCCTCCTATGGACGGAAGAATC 84407 || | ||||||||| |||||||| ||||||||||| || || ||||| || | ||| Sbjct 113594 TTATCCTTCATGAAATAGAACGGGTCTGACAACGTCCAGCCACCGATGGAAGGGACAATT 113653 Query 84408 TTTAGGTGCGGGTTCGCCAATTT-AGCTGCCATCAATTGTCCAAAATTGCCTTTATACGG 84466 || |||| || | || ||| ||| ||||||| || |||||||| |||||||| || Sbjct 113654 TTCAGGTTTGGATAGGCTTTTTTCAGC-GCCATCAGCTGACCAAAATTACCTTTATAAGG 113712 Query 84467 TTCGTTCCAAGCGGACACGCCCTTTTGGGGCTTTTGTACGGCGGCCCACGGATCGTGGAT 84526 | | | | ||||| | || ||| | || || || ||||| |||||||| || Sbjct 113713 TGCTGAATATTCACTGACGCCTTGCTGAGGCATCTGCACCGCAGCCCAGGGATCGTGTAT 113772 Query 84527 GGCAATTTTAAAATCCGCACGTCCCCTGCACGATCGTTGCAGAGATTCGAAACTACCGGG 84586 |||| |||||||||| ||| ||| || | ||||||| | | ||||| || Sbjct 113773 CGCAACTTTAAAATCCTGACGCCCCGCACAGGCGCGTTGCAAGGCCTGAAAACTGCCCTC 113832 Query 84587 TATCACTTTGAGAGCATCGTTTATTCCATTACCGCCGCAAATGGGTATGAAACCGTACAA 84646 || ||| | | ||||| || || | ||||||||||| || |||| |||||||| Sbjct 113833 AATGCTTTTTAAACTGTCGTTAATCCCGTCCCCGCCGCAAATCGGCGTGAAGCCGTACAA 113892 Query 84647 CAAGTGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAATTGCGCCCGTACACTCC 84706 | |||| | || || || | ||| || |||| || ||| || ||||| || Sbjct 113893 GATATGTGTCAGGTTCTGCGCAGGGATTTTATCCACGGAGAATCCGCGACCATACACGCC 113952 Query 84707 CCATTCAACAAAATACGCAGCAAC 84730 ||| ||||||||||| || |||| Sbjct 113953 CCACTCAACAAAATATGCGCCAAC 113976 >seq8056 Length=34938 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | ||||| || || || || || || || |||| || || || Sbjct 31903 ATGCAGATTTTCGTGAAAACTTTGACCGGAAAGACGATCACATTGGAGGTTGAGCCCTCA 31962 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | || | ||| |||||| || ||||| || | ||| | ||| Sbjct 31963 GATACGATCGAAAATGTAAAGGCGAAAATTCAAGACAAAGAAGGAATTCCTCCGGATCAA 32022 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | |||||||| ||||| |||||| |||||||| || | ||||||||||| Sbjct 32023 CAACGTCTTATCTTCGCTGGAAAACAATTAGAAGATGGTCGCACCCTTTCCGATTACAAT 32082 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || |||||||| || || || ||| |||| | ||| | |||||||| Sbjct 32083 ATCCAGAAGGAGTCGACCCTCCATTTGGTGCTCCGTCTCCGAGGAGG 32129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357824363957236