Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq742 219 8e-52
seq6691 165 2e-35
>seq742
Length=196864
Score = 219 bits (242), Expect = 8e-52
Identities = 525/786 (67%), Gaps = 20/786 (3%)
Strand=Plus/Minus
Query 244664 ACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTG 244723
|||||| |||| |||| ||||| |||||||| || || || || | |||
Sbjct 48027 ACAAACATATTGACAGCGATAGAGGCCAAATTGCAGACAGCTACTTCATCTTTGGAAGTG 47968
Query 244724 TACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTG 244783
|| | || || || |||||||||||||||||||| || || ||||| | || || |||
Sbjct 47967 TATTCAACTATTTCTGTGCAGAGGTTACTGCACTTAATAGTTCCCAGATTTTGTTGGTTG 47908
Query 244784 GACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCG 244843
||| |||||| ||||||||||| |||||| |||| || || || | || |
Sbjct 47907 CTCTTTCGGTTGCACGCGTCCTTGTACAGCATGTAGGGGGTTCCCGTTTCTACTTGAGAT 47848
Query 244844 ACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCC 244903
||| || | |||| | | ||||||| | || | || || || ||
Sbjct 47847 TCGATGATGGCCATCCACAAAGTCTGCGCCTTGATCTTCTTCTTAGAACGACCTTCGGCT 47788
Query 244904 TCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGG-GCA 244962
|||||||| |||||||| ||||| || || |||||| ||||| || |||||| |||
Sbjct 47787 TCGTAGCGTGTGTACAGAGCCTCAAATTCTTCTCCCCAGCACTCGTGTAAGCCGGGAGCA 47728
Query 244963 -CGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGT 245021
|| | ||||||||||||||||| || || | || ||| | || |||||| || |
Sbjct 47727 TCGTGG--GGGCACATGAGACTCCAATCCTCGTTGCTCTCGACACGCTTCATGAACAGAT 47670
Query 245022 CGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCT 245081
|||||||||| | | | | ||| | ||| | | | || ||| ||||| ||||
Sbjct 47669 CGGGGATCCACAAGCCGTAGAATAAGTCACGTGCACGAACTTCCTCCTTTCCAGTATTCT 47610
Query 245082 TCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGG 245141
| ||| || || || ||||| | ||| ||||||| ||||| | ||| | ||||| |
Sbjct 47609 TTTTCAAGTCTAAGAATTCAAATATGTCCGCGTGCCACGGCTCAACGTAAATAGCGAAAG 47550
Query 245142 CGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC-GCGTT---GAAGATG 245197
| ||||||| |||||| ||||||||||| || | || || | ||| | | |
Sbjct 47549 CTCCGGGCCTCTTGTTTCCTCCCTGGTCTACA----TAGCGGGCCGTGTTATTGTACACA 47494
Query 245198 CGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTG 245257
||||| | || || | || || ||| ||||| || ||| |||||||| ||||||
Sbjct 47493 CGCAGCATGGGGACCAACCCATTGGAGACTCCGTTAGTACCCGCGATGTAGGAACCCTTG 47434
Query 245258 CCCCTGAGGTTGCTGATGGACATG----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGC 245313
| | || ||| | || ||||| || | || || || |||||| | |||||
Sbjct 47433 GCTCGGA---TGCAG-TGTACATGAAGGCCGATACCTCCAGCAGACTTGGAAACCAGGGC 47378
Query 245314 GCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAA 245373
|| ||| | |||||| || || || || || || ||||| || || ||
Sbjct 47377 ACACTGCTTCAGGGTGTCGTAGATCCCTTCAATACTATCATCGCTCATGGCCAGTAGGAA 47318
Query 245374 GCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGT 245433
||| || |||||||| || ||| || | | ||| ||||| ||||||||||| ||
Sbjct 47317 GCAAGAAGACAGCTGAGGACGGGGCGTGGCTGCGGAGAATAGAGTAGGGCTGGCGTGAGT 47258
Query 245434 AAAGTA 245439
|||||
Sbjct 47257 GAAGTA 47252
>seq6691
Length=42033
Score = 165 bits (182), Expect = 2e-35
Identities = 355/523 (68%), Gaps = 11/523 (2%)
Strand=Plus/Minus
Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668
|| ||||| || ||||||| | || || | ||||||||||| |||||||| || |
Sbjct 14454 CTTTTCAACGCTGTGGAGACCCTACCGTGTGTGAAGAAGAAGGCAGACTGGGCCCTGCAG 14395
Query 42669 TGGATCG--AGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCG 42726
||||||| || | | || || || ||||| ||| | |||| ||||| | ||| |
Sbjct 14394 TGGATCGGCAGCGACACG--GCCACCTTCGGGGAGCGTGTGGTGGCCTTCGCTTGCGTAG 14337
Query 42727 AGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCG 42785
| || ||||||||||| ||| || ||||||||||| ||||| ||| || || ||
Sbjct 14336 AAGGAATCTTCTTCTCCGGCAGTTTTGCCTCCATCTTTTGGCTGAAGAAGCGTGGCCTC- 14278
Query 42786 ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGAC 42845
|||||||| | |||||| ||||| | ||| | | |||||||| || || | |||
Sbjct 14277 ATGCCCGGCTTGACCTTCAGCAACGAGTTGATCTCCCGAGACGAGGGTCTCCACTGCGAC 14218
Query 42846 TTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGG 42905
|||||||||||| ||||| | ||| | || || ||| | || ||||
Sbjct 14217 TTTGCCTGCCTCATGTTC---AAACACTTAGTACAGAAACCCAGCCCCGCACGAGTCCTA 14161
Query 42906 GCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTG 42965
|| ||| ||| ||| || || || || | ||||| ||||| | | ||||||||
Sbjct 14160 GCTATCGTCAAGGATGCTGTCATCATTGAACAAGAGTTTCTCACCGACGCCCTGCCCGTC 14101
Query 42966 TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCAT 43025
|| | ||||||||| |||||| |||| |||| || | | || |||||||
Sbjct 14100 AGACTACTGGGCATGAACTGCGACCTGATGTCGCAGTATATTGAATTTGTGGCCGACCGG 14041
Query 43026 CTCCTGTGCCAGATGGGTCTCAGCC-GCCTCTACAACACGCCGTGCCCCTTCGACTTTAT 43084
||| || | |||| || ||| | |||| | | ||||||| ||| ||
Sbjct 14040 CTCTTGGTGGACCTGGG-CTGTGCCAAGCACTACGGATCCAAGAACCCCTTCAGCTTCAT 13982
Query 43085 GGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAG 43127
||| | ||||| |||| |||||||||||||| |||||||||
Sbjct 13981 GGACATGATCTCCCTGGAAGGCAAGACCAACTTCTTCGAGAAG 13939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943526666943840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |