Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_009235.2 Length=48674 Score E Sequences producing significant alignments: (Bits) Value seq9360 82.4 2e-11 >seq9360 Length=49093 Score = 82.4 bits (90), Expect = 2e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 17976 GCATGGACGAACAATCCGGCGTGGGTCTACTACGGCCTACTTCTCGACAAGCTCAACGGA 18035 ||||||||||| || ||||| ||| | | || | || | || | || | || Sbjct 31021 GCATGGACGAATAACCCGGCATGGATATTTTATGATCTGGTGCTGAATAAAATTTTTGGT 30962 Query 18036 TTGGGTGACCGTGTCGATGCTTCGATGGTCGATAAGTGGGCGCTGTACGCAATCGCGCGT 18095 |||| ||||||||||||| | ||| | || ||||| | | ||||| ||||||| Sbjct 30961 ATGGGAAACCGTGTCGATGCCACCATGATTGACCGGTGGGAGTTATACGCCATCGCGCAA 30902 Query 18096 TACTGCGACGAACTCGTGTCCGACGGGAAGGGCGGCAAGGAGCCGCGCTTCACCTGCAAC 18155 |||||||||||| ||||| ||||| ||||||| || || ||||| |||||| || Sbjct 30901 TACTGCGACGAAAAAGTGTCTGACGGAGCCGGCGGCACTGAACCCCGCTTTACCTGCGAC 30842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155507983203888