Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq14843 91.5 1e-13 >seq14843 Length=30539 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/94 (84%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 115585 || |||||||| ||||||||||||| || |||||||| ||| | | ||| |||||||||| Sbjct 30109 TGGCATGTATTAGCTCTAGAATTACTACAGTTATCCATGTAGCAG-GTACGATCTAAGGA 30051 Query 115586 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 |||| | ||||| || ||||||||||| ||| || Sbjct 30050 ACCATAGCTGATTTAATGAGCCATTCGCGGTTTC 30017 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/94 (84%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 114388 || |||||||| ||||||||||||| || |||||||| ||| | | ||| |||||||||| Sbjct 30109 TGGCATGTATTAGCTCTAGAATTACTACAGTTATCCATGTAGCAG-GTACGATCTAAGGA 30051 Query 114389 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 |||| | ||||| || ||||||||||| ||| || Sbjct 30050 ACCATAGCTGATTTAATGAGCCATTCGCGGTTTC 30017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396729298644868