Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_009540.1
Length=49902
Score E
Sequences producing significant alignments: (Bits) Value
seq9360 89.7 2e-13
seq725 82.4 2e-11
>seq9360
Length=49093
Score = 89.7 bits (98), Expect = 2e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 22020 GGCGGTTATACTGGCGACGGTGGCAAATATGATCCGGCTGGCGTTGTTCATAAGGGTGAG 22079
||||| ||||| || |||| ||||| ||||| || || || |||||||| || ||
Sbjct 34900 GGCGGCTATACCGGGCACGGCGGCAAGTATGAGCCTGCCGGTGTTGTTCACCGTGGAGAA 34841
Query 22080 TTTGTTTTCACCAAAGAGGCAACGCAAAGAATCGGAGCTAAAAACCTGTATCGCATGATG 22139
||||||||||| ||||| |||| ||||||| | | || || ||||| |||||
Sbjct 34840 TTTGTTTTCACAAAAGAATCAACCAGCCGAATCGGTGTAACTAATCTCTATCGTCTGATG 34781
Query 22140 CGAGGTTATGCAAACGGCGGTC 22161
|| |||||||| | |||||||
Sbjct 34780 CGCGGTTATGCCACGGGCGGTC 34759
>seq725
Length=236385
Score = 82.4 bits (90), Expect = 2e-11
Identities = 101/138 (73%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 20061 GGGCAATATAACCAGGCCATGCGAATGCTTCCGGCTCAGATCACTGACGTTGTAACGTCG 20120
||||| ||| ||||| ||||| | | || ||||| | || || ||||| || ||
Sbjct 207591 GGGCAGTATCGTCAGGCGATGCGCCAGTTGCCCGCTCAACTAACCGATGTTGTCACATCT 207650
Query 20121 CTGGCTTCCGGTATGCCTGTTTGGTTGGTTGCAATCCAGCAGGGTGGACAGATTAAAGAT 20180
|| || || || ||||| || | |||| || || ||||| || |||||||||||||||
Sbjct 207651 CTTGCCTCGGGCATGCCCGTATATATGGTCGCCATTCAGCAAGGCGGACAGATTAAAGAT 207710
Query 20181 TCTTTCGGCGGTGTTGGT 20198
|| ||||| || || |||
Sbjct 207711 TCGTTCGGTGGCGTCGGT 207728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159434371134112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |