Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_009540.1 Length=49902 Score E Sequences producing significant alignments: (Bits) Value seq9360 89.7 2e-13 seq725 82.4 2e-11 >seq9360 Length=49093 Score = 89.7 bits (98), Expect = 2e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 22020 GGCGGTTATACTGGCGACGGTGGCAAATATGATCCGGCTGGCGTTGTTCATAAGGGTGAG 22079 ||||| ||||| || |||| ||||| ||||| || || || |||||||| || || Sbjct 34900 GGCGGCTATACCGGGCACGGCGGCAAGTATGAGCCTGCCGGTGTTGTTCACCGTGGAGAA 34841 Query 22080 TTTGTTTTCACCAAAGAGGCAACGCAAAGAATCGGAGCTAAAAACCTGTATCGCATGATG 22139 ||||||||||| ||||| |||| ||||||| | | || || ||||| ||||| Sbjct 34840 TTTGTTTTCACAAAAGAATCAACCAGCCGAATCGGTGTAACTAATCTCTATCGTCTGATG 34781 Query 22140 CGAGGTTATGCAAACGGCGGTC 22161 || |||||||| | ||||||| Sbjct 34780 CGCGGTTATGCCACGGGCGGTC 34759 >seq725 Length=236385 Score = 82.4 bits (90), Expect = 2e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 20061 GGGCAATATAACCAGGCCATGCGAATGCTTCCGGCTCAGATCACTGACGTTGTAACGTCG 20120 ||||| ||| ||||| ||||| | | || ||||| | || || ||||| || || Sbjct 207591 GGGCAGTATCGTCAGGCGATGCGCCAGTTGCCCGCTCAACTAACCGATGTTGTCACATCT 207650 Query 20121 CTGGCTTCCGGTATGCCTGTTTGGTTGGTTGCAATCCAGCAGGGTGGACAGATTAAAGAT 20180 || || || || ||||| || | |||| || || ||||| || ||||||||||||||| Sbjct 207651 CTTGCCTCGGGCATGCCCGTATATATGGTCGCCATTCAGCAAGGCGGACAGATTAAAGAT 207710 Query 20181 TCTTTCGGCGGTGTTGGT 20198 || ||||| || || ||| Sbjct 207711 TCGTTCGGTGGCGTCGGT 207728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159434371134112