Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_009816.1
Length=70579
Score E
Sequences producing significant alignments: (Bits) Value
seq35 219 2e-52
>seq35
Length=455554
Score = 219 bits (242), Expect = 2e-52
Identities = 459/672 (68%), Gaps = 18/672 (3%)
Strand=Plus/Plus
Query 59889 GGATTGCCTCGGTTAGCTGCATCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGA 59948
|||||| | ||||| | | || || ||||| | ||| |||||||| || |||||||||
Sbjct 14291 GGATTGGCGCGGTTCACCGTGTCTTCAAACATCATGTACGGATAGCCGGATTCAAACTGA 14350
Query 59949 ACCTCTGCGATGGTCTGGAACAGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCA 60008
| ||| || | |||||| | | || |||| ||| | | || || | |
Sbjct 14351 ATCTCCGCCAGCACCTGGAAGAATTCGCGCGCGTTGATTTTGCTTTTGTGAATGCGTTTG 14410
Query 60009 TCTTTTAGCCACGTGTCGTACATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTAC 60068
|| || | | | | ||| ||||| | | | || || |||| | | ||||||
Sbjct 14411 TCATTCACCATCTCGCGGTATTTCTCGCTGATGCTGATTTCAGACATCGGCACGCCGTAC 14470
Query 60069 ACCTTATTGATGTCATAAGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGG 60128
|| || | | || ||| || ||||| ||| |||| ||| | | ||| || || |
Sbjct 14471 ACTTTCTCCACGTGATACGGCGAGAACAGGTACATATCTTCGTTGTTCTTCGCCAGTTCG 14530
Query 60129 AACGTGACATCAGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCG 60188
||||||| ||| |||| || || || || || || || ||||||||||| || ||||||
Sbjct 14531 AACGTGATATCCGGAATGACCACACCGAGCGACAGCGTTTTAATACGGATTTTTTCGTCG 14590
Query 60189 GCGTTTTCACGCTTGGTATCCAGG-AACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATA 60247
|||||||| ||||| ||||| ||| ||||| || || || ||||| || ||||||| |||
Sbjct 14591 GCGTTTTCGCGCTTAGTATCGAGGAAACGC-AGAATATCCGGGTGATGAGCGTTCAGATA 14649
Query 60248 TACCGCCCCTGCGCCCTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAG 60307
||||| || |||||||| | || || || ||||| | ||| |||||| |||||| ||
Sbjct 14650 CACCGCGCCCGCGCCCTGACGCGCGCCGAGCTGGTTGGCGTAAGAGAAGGCATCTTCCAG 14709
Query 60308 AATCTTCATCACAGGGATGACTCCAGAGGCCTGACCTTCTCGA--CCCTTAATCGGAGCT 60365
|||||||| | || || || || || | ||| || |||| | ||| ||||| ||
Sbjct 14710 CATCTTCATGATCGGAATAACGCCGGAAGACTG--GTTTTCGATGCGCTTGATCGGCGCG 14767
Query 60366 CCTGCCTCGCGGAGGTTGG--AGAATCCAATGCCGACTCCGCCACCACGCTTAGACAGCT 60423
|| | || |||| ||||| || || || | | || ||||| || || || || ||||
Sbjct 14768 CCCACTTCACGGATGTTGGTCAGCAT--AAAGGCCACGCCGCCGCCGCGTTTGGAGAGCT 14825
Query 60424 G---GAGAGAGTCCTGAACGATTCGACCGATGGACCCCATGGTGTCCTGAACATCGAGGA 60480
| | |||| ||| ||| |||||||| || ||||| |||| | || | |
Sbjct 14826 GTAAGGCCGAGT--TGACCGA-GCGACCGATAGATTCCATGTTGTCTTCAATGCGTAACA 14882
Query 60481 TGAAGCATGATACTGGCTTGCCTGCGTCGAGAAGCCCCGC-GTTGAGGAAGGTCGGAGTT 60539
||| || || || | | ||| ||| | |||| ||||||||| ||||| |||
Sbjct 14883 GGAAACAGGACACCAGTTCGCC-GCGCTGTTTTTTTCCGCAGTTGAGGAATGTCGGCGTT 14941
Query 60540 GCAGGCTGGAAG 60551
|| |||||||||
Sbjct 14942 GCTGGCTGGAAG 14953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 225538633535960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |