Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq35 219 2e-52 >seq35 Length=455554 Score = 219 bits (242), Expect = 2e-52 Identities = 459/672 (68%), Gaps = 18/672 (3%) Strand=Plus/Plus Query 59889 GGATTGCCTCGGTTAGCTGCATCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGA 59948 |||||| | ||||| | | || || ||||| | ||| |||||||| || ||||||||| Sbjct 14291 GGATTGGCGCGGTTCACCGTGTCTTCAAACATCATGTACGGATAGCCGGATTCAAACTGA 14350 Query 59949 ACCTCTGCGATGGTCTGGAACAGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCA 60008 | ||| || | |||||| | | || |||| ||| | | || || | | Sbjct 14351 ATCTCCGCCAGCACCTGGAAGAATTCGCGCGCGTTGATTTTGCTTTTGTGAATGCGTTTG 14410 Query 60009 TCTTTTAGCCACGTGTCGTACATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTAC 60068 || || | | | | ||| ||||| | | | || || |||| | | |||||| Sbjct 14411 TCATTCACCATCTCGCGGTATTTCTCGCTGATGCTGATTTCAGACATCGGCACGCCGTAC 14470 Query 60069 ACCTTATTGATGTCATAAGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGG 60128 || || | | || ||| || ||||| ||| |||| ||| | | ||| || || | Sbjct 14471 ACTTTCTCCACGTGATACGGCGAGAACAGGTACATATCTTCGTTGTTCTTCGCCAGTTCG 14530 Query 60129 AACGTGACATCAGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCG 60188 ||||||| ||| |||| || || || || || || || ||||||||||| || |||||| Sbjct 14531 AACGTGATATCCGGAATGACCACACCGAGCGACAGCGTTTTAATACGGATTTTTTCGTCG 14590 Query 60189 GCGTTTTCACGCTTGGTATCCAGG-AACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATA 60247 |||||||| ||||| ||||| ||| ||||| || || || ||||| || ||||||| ||| Sbjct 14591 GCGTTTTCGCGCTTAGTATCGAGGAAACGC-AGAATATCCGGGTGATGAGCGTTCAGATA 14649 Query 60248 TACCGCCCCTGCGCCCTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAG 60307 ||||| || |||||||| | || || || ||||| | ||| |||||| |||||| || Sbjct 14650 CACCGCGCCCGCGCCCTGACGCGCGCCGAGCTGGTTGGCGTAAGAGAAGGCATCTTCCAG 14709 Query 60308 AATCTTCATCACAGGGATGACTCCAGAGGCCTGACCTTCTCGA--CCCTTAATCGGAGCT 60365 |||||||| | || || || || || | ||| || |||| | ||| ||||| || Sbjct 14710 CATCTTCATGATCGGAATAACGCCGGAAGACTG--GTTTTCGATGCGCTTGATCGGCGCG 14767 Query 60366 CCTGCCTCGCGGAGGTTGG--AGAATCCAATGCCGACTCCGCCACCACGCTTAGACAGCT 60423 || | || |||| ||||| || || || | | || ||||| || || || || |||| Sbjct 14768 CCCACTTCACGGATGTTGGTCAGCAT--AAAGGCCACGCCGCCGCCGCGTTTGGAGAGCT 14825 Query 60424 G---GAGAGAGTCCTGAACGATTCGACCGATGGACCCCATGGTGTCCTGAACATCGAGGA 60480 | | |||| ||| ||| |||||||| || ||||| |||| | || | | Sbjct 14826 GTAAGGCCGAGT--TGACCGA-GCGACCGATAGATTCCATGTTGTCTTCAATGCGTAACA 14882 Query 60481 TGAAGCATGATACTGGCTTGCCTGCGTCGAGAAGCCCCGC-GTTGAGGAAGGTCGGAGTT 60539 ||| || || || | | ||| ||| | |||| ||||||||| ||||| ||| Sbjct 14883 GGAAACAGGACACCAGTTCGCC-GCGCTGTTTTTTTCCGCAGTTGAGGAATGTCGGCGTT 14941 Query 60540 GCAGGCTGGAAG 60551 || ||||||||| Sbjct 14942 GCTGGCTGGAAG 14953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225538633535960