Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_010106.1 Length=52975 Score E Sequences producing significant alignments: (Bits) Value seq9405 147 7e-31 >seq9405 Length=40329 Score = 147 bits (162), Expect = 7e-31 Identities = 174/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 51854 GTAATGGCTTACACTACCTTTTCACAAACCAAGAATAACCAATTACTAGAGCCAATGTTC 51913 || |||||||||| ||| ||||| || | || || | || | || |||||||||||| Sbjct 35631 GTTATGGCTTACAGTACTTTTTCCCAGAATAAAAACGATCAGCTTCTTGAGCCAATGTTC 35690 Query 51914 TTTGGTCAGAACGTTAACGTTGCTCGATATGACCAACAGAAGTACGGCATATTCGAGAAG 51973 ||||| ||| ||||||||||| || | ||||| |||||| | | || || || || Sbjct 35691 TTTGGCCAGTCGGTTAACGTTGCCCGTTTCGACCAGCAGAAGCATGAAATCTTTGAAAAA 35750 Query 51974 TTAATTGAGAAACAATTGTCATTCTTCTGGCGACCGGAAGAGGTAGACGTTTCCCAGGAC 52033 | || || || || |||| ||||||||||| ||||||||| | || ||||||| ||| Sbjct 35751 CTGATCGAAAAGCAGCTGTCCTTCTTCTGGCGTCCGGAAGAGATTGATGTTTCCCGCGAC 35810 Query 52034 CGTATTGATTATCAGAAGCTACCTGCAAACGAACAACACATTTTCACCAGTAATCT 52089 ||||| |||| |||| | | || | ||||| ||||||| ||| || ||||| Sbjct 35811 CGTATCGATTTTCAGGCGTTGCCGGATCACGAAAAACACATCTTCCTGAGCAATCT 35866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169259933112596