Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq223 208 8e-49
seq8056 116 4e-21
seq8521 109 5e-19
seq48539 104 2e-17
seq15643 102 8e-17
seq4062 95.1 1e-14
>seq223
Length=511576
Score = 208 bits (230), Expect = 8e-49
Identities = 348/501 (69%), Gaps = 8/501 (2%)
Strand=Plus/Minus
Query 27464 GTCGTCGCCGCGTACTTTGTCGAATGGGGTGTGTACGGCCGTAATTTTGCCGCGGACCGC 27523
||||| | ||| || ||||| || ||||| ||||| || || || ||| |||
Sbjct 113979 GTCGTTGGCGCATATTTTGTTGAGTGGGGCGTGTATGGTCGCGGATTCTCCGTGGATAAA 113920
Query 27524 GTACCGGCGCCCAACCTGTCACATTTACTATACGGGTTCGTGCCGATATGCGGCGGCGAC 27583
| || |||| |||||| ||||| | | ||||| ||| |||||| |||||||| |||
Sbjct 113919 ATCCCTGCGCAGAACCTGACACATATCTTGTACGGCTTCACGCCGATTTGCGGCGGGGAC 113860
Query 27584 GGCATCAACGACAGCCTTAAAACTATTCCGGGTAGTTTCGAAGCGTTGCAAAAGTCGTGC 27643
|| || |||||||| | |||| ||| ||| ||||| | || |||||| | ||
Sbjct 113859 GGGATTAACGACAGTTTAAAAAGCATTGAGGGCAGTTTTCAGGCCTTGCAACGCGCCTGT 113800
Query 27644 GCGGGTCGTGAAAACTTTAAAGTGGCCATTCACGATCCGTGGGCTGCATTGCAAAAACCA 27703
||||| ||| | | |||||||| || || |||||||| |||||||| |||| | ||
Sbjct 113799 GCGGGGCGTCAGGATTTTAAAGTTGCGATACACGATCCCTGGGCTGCGGTGCAGATGCCT 113740
Query 27704 CAAAAAGGCGTTTCGGCTTGGACGGAACAATACAAAGGTAATTTTGGACAGTTAATGGCG 27763
|| ||||||| | | | | || || |||||||||||||| ||| | ||||||
Sbjct 113739 CAGCAAGGCGTCAGTGAATATTCAGCACCTTATAAAGGTAATTTTGGTCAGCTGATGGCG 113680
Query 27764 ATAAAGCGTGCAAACCCGCATTTAAAAATTCTACCGTCCATAGGAGGGTGGACGCTGTCG 27823
| || || | || | | |||||| | || ||||| || || |||||| ||||
Sbjct 113679 CTGAAAAAAGCCTATCCAAACCTGAAAATTGTCCCTTCCATCGGTGGCTGGACGTTGTCA 113620
Query 27824 GATCCATTTTACTTTTTTCACGACGCT---GGCAAA-CGCGCCACATTCGTCGAATCGGT 27879
|| || || || ||||| || | ||| || || | | ||||| | |||||
Sbjct 113619 GACCCGTTCTA----TTTCATGAAGGATAAGGCGAAGCGGGACGTCTTCGTAGCCTCGGT 113564
Query 27880 TCGCGAATTTCTGCAAACTTGGAAATTTTTCGACGGCGTGGACATCGATTGGGAATTTCC 27939
||||| |||||||| ||||| || || ||||| ||||| || || |||||||||||
Sbjct 113563 AAAAGAATTCCTGCAAACCTGGAAGTTCTTTGACGGTGTGGATATTGACTGGGAATTTCC 113504
Query 27940 TGGCGGTAACGGCGCAAACCC 27960
|||||| ||| | ||||||
Sbjct 113503 GGGCGGTGGCGGTGAAAACCC 113483
>seq8056
Length=34938
Score = 116 bits (128), Expect = 4e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | ||| | ||||| || || || || |||||||| | | |||||| | |||
Sbjct 32114 AGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCGGAAAGGGTGCGACCATCT 32055
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | || || || || | || || || || || || ||||||||||||||||| |||
Sbjct 32054 TCTAATTGTTTTCCAGCGAAGATAAGACGTTGTTGATCCGGAGGAATTCCTTCTTTGTCT 31995
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| ||||| ||||||| || | ||||| || || || || | || | |||
Sbjct 31994 TGAATTTTCGCCTTTACATTTTCGATCGTATCTGAGGGCTCAACCTCCAATGTGATCGTC 31935
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| |||||||||||||| |||||||| |||||
Sbjct 31934 TTTCCGGTCAAAGTTTTCACGAAAATCTGCAT 31903
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|| ||||||| || |||||||| ||||||||||| || | || ||| || | |||||
Sbjct 32339 ACAAGATGAAGGGTAGATTCTTTCTGAATGTTGTAGTCGGAGAGGGTACGTCCATCTTCC 32280
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
||||||||||| || |||| | || |||||| || || || || ||||| || |||||
Sbjct 32279 AGCTGCTTGCCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATGCCTTCCTTATCTTGA 32220
Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414
||||| ||| || || | ||||| || || || || | || | ||||||
Sbjct 32219 ATTTTGGCCTTGACGTTTTCAATAGTATCTGAGGGTTCGACCTCCAGGGTGATTGTCTTG 32160
Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || || || || ||||| || |||||
Sbjct 32159 CCAGTTAATGTCTTGACGAAGATCTGCAT 32131
>seq8521
Length=40141
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || ||||| | || || || || || |||||||| || |
Sbjct 2474 ACCACCACGCAGACGTAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGA 2415
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| | |||||||||||||| |||||| | || | || |||||| || || ||
Sbjct 2414 GAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCTGGGGG 2355
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || || || ||||| ||| ||| ||| | | || || || ||
Sbjct 2354 GATACCTTCCTTGTCCTGGATTTTGGCCTTGACATTCTCAATACTGTCCGAGGGTTCAAC 2295
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||||||||||||| || || || || |||||
Sbjct 2294 CTCCAGTGTAATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 2247
Score = 100 bits (110), Expect = 3e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || || |||||||| || || | || ||| || | ||||| ||||||
Sbjct 2221 TGAAGAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTACGTCCATCTTCCAGCTGC 2162
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| ||||| | || | || |||||| || || || || ||||| || || || || ||
Sbjct 2161 TTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATACCTTCCTTATCCTGGATCTTG 2102
Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419
||||| ||| ||| | ||| ||| || || || |||| || | |||||||||||
Sbjct 2101 -GCTTTCACATTCTCAATTGTGTCAGAGGGCTCAACCTCTAGGGTGATTGTCTTGCCGGT 2043
Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443
| || || |||||||| |||||
Sbjct 2042 AAGGGTCTTCACGAAAATCTGCAT 2019
Score = 86.0 bits (94), Expect = 6e-12
Identities = 96/127 (76%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| || ||||||||||| || | || ||| || | |||||||| |||
Sbjct 1993 TGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGACCATCTTCAAGTTGC 1934
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || ||| | || | || |||||| || || ||||| ||||| || ||||| | | ||
Sbjct 1933 TTACCAGCAAAGATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTGTCTTGGA-TCTT 1875
Query 64361 TGCTTTA 64367
||||||
Sbjct 1874 GGCTTTA 1868
>seq48539
Length=7100
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||||||||| || ||||| || | | |||||| | || || | ||||
Sbjct 6689 TGAAGGGTAGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATCCTCCAACTGC 6630
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || || | || | || |||||| || ||||| |||||||| || ||||| | | ||
Sbjct 6629 TTTCCTGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCTTGGA-TCTT 6571
Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419
||||| ||| || | ||| ||| | || ||||||| ||| | ||||| |||||
Sbjct 6570 GGCTTTGACATTTTCAATTGTGTCAGAAGGCTCAACTTCTAGAGTAATAGTCTTTCCGGT 6511
Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443
| || |||||||| || |||||
Sbjct 6510 AAGGGTCTTTACGAAGATCTGCAT 6487
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || |||||||||||||| || | | ||| || | ||||| | |||
Sbjct 6917 TGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTACGTCCATCTTCCAATTGC 6858
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || ||| | || | || |||||| || || ||||||||||| || ||||| || ||
Sbjct 6857 TTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGGAATTCCTTCCTTGTCTTGAATCTTA 6798
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| || | ||||| || || ||||| | || | ||| ||||| ||
Sbjct 6797 GCCTTAACATTTTCAATGGTATCTGAGGGTTCAACTTCCAAGGTGATGGTTTTGCCAGTA 6738
Query 64421 AAAGTTTTTACGAAAATTTGCATT 64444
| || || || ||||| ||||||
Sbjct 6737 AGGGTCTTGACAAAAATCTGCATT 6714
>seq15643
Length=27379
Score = 102 bits (112), Expect = 8e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || |||||||| |||| || || || || || || ||||||||||
Sbjct 12274 ACCTCCTCGGAGTCGAAGCACTAAGTGAAGTGTGGACTCCTTCTGGATATTGTAATCTGA 12215
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || | || || ||||| || ||||| | || | || |||||| || |||||
Sbjct 12214 AAGGGTACGTCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGAGG 12155
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
||||||||||| ||||| | | || ||||| ||| || | || ||| || || |
Sbjct 12154 GATTCCTTCTTTGTCTTGGA-TCTTGGCTTTGACATTTTCGATAGTGTCAGAGGGCTCTA 12096
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
| || | || | ||| || || || | || || |||||||| ||||||
Sbjct 12095 CCTCAAGGGTGATGGTTTTCCCCGTAAGGGTCTTCACGAAAATCTGCATT 12046
>seq4062
Length=67394
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||| | || ||||| || || | || || || || || |||||||| || |
Sbjct 48390 CCACCGCGAAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 48331
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || | | ||||| |||||||||||||| | || |||| ||||||||| || ||
Sbjct 48330 AGTGTCCTGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGG 48271
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|||||||| || ||||| || || ||| ||| || | || ||| | |||||
Sbjct 48270 ATTCCTTCCTTATCTTGGATCTTGGCCTTGACATGTTCGATGGTGTCAGAAGGCTCCACC 48211
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| || | || || ||||| || |||||
Sbjct 48210 TCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 48164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499214893122960
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