Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq223 125 2e-24 >seq223 Length=511576 Score = 125 bits (138), Expect = 2e-24 Identities = 236/339 (70%), Gaps = 11/339 (3%) Strand=Plus/Plus Query 32827 CCGCCAAGCATCTGCATGACGCCACCCATTTGTGGAATGACAATCTCAGTGGTGTATTTG 32886 ||||| |||||||||||| ||| |||| | || ||| | || ||||||||||| Sbjct 459544 CCGCCGAGCATCTGCATGGTGCCGCCCACGTT---AACGACGACTTCGGTGGTGTATTTT 459600 Query 32887 TCCACGCC-GCTGCTG-TCAGTCCACTTACGAGTGCGAAGTTGTCCTTCTATATAAACCT 32944 || ||||| || ||| || ||||| ||||| || | ||| ||||| || || |||| Sbjct 459601 TCAACGCCAGC--CTGATCGGTCCATTTACGGGTTTGCAGTGCGCCTTCGATGTAGACCT 459658 Query 32945 GCGACCCTTTACGAAGATACTCTCCTGCAACTTCCGCAATTTTTCCGAAGATAACAACTC 33004 | || ||||| || || || ||||| ||||| || | ||| ||||| | || || | Sbjct 459659 GAGAACCTTTCTTCAGGTATTCGCCTGCGACTTCTGCTAATTTGCCGAACAACACCACAC 459718 Query 33005 GATGCCATTCAGTATGTTCTTTCTTTTCTCCTGTTTGCTTGTCTTTCCACTGCTCAGATG 33064 | |||||||| || | |||||||| || || || ||||| ||| |||||| | Sbjct 459719 GGTGCCATTCCGTTTTTTCTTTCTGCTCGCCGGTGGCTTTGTCACGCCAGCTCTCAGACG 459778 Query 33065 TTGCAACAGAAAGGTTCGCAATTGCAGAGCC-TGATGC-TGAATATTTAACTTCAGGGTC 33122 |||| | || | ||| |||| || ||| | | || || || ||||| ||||| Sbjct 459779 TTGCCAGAGTGATGTTGGCAACCGCGCCGCCGTTAGGCATG--TAGCGGACTTCCGGGTC 459836 Query 33123 ATTTCCGAGAGTGCCGACAATGATTACTTTATTTACGCC 33161 | ||| ||| | ||||| | || ||||| |||||||| Sbjct 459837 TTGTCCCAGATTACCGACGAGAATAACTTTGTTTACGCC 459875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143923859856004