Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_010583.1 Length=111382 Score E Sequences producing significant alignments: (Bits) Value seq828 107 1e-18 >seq828 Length=218660 Score = 107 bits (118), Expect = 1e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 29171 AGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAGTGCATTAAATCGAAC 29230 ||| || ||||| |||| ||||| ||| |||||| ||||||| || || || || Sbjct 42143 AGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCAGTGAGTTGAAACGTAC 42202 Query 29231 AGCATAGCCAGAGACACGAATGGTCAACTGAGGGTATTTTTCAGGATGTTTCTGTGCATC 29290 ||||||||||| |||||||| |||| ||| |||||||| ||||||||||| ||||| Sbjct 42203 CGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAGGATGTTTAACCGCATC 42262 Query 29291 CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCCCTCGAC 29344 || ||||||| | || || || || ||||||||||| || || || Sbjct 42263 TTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGACCACCTTCCAC 42316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355998696821582