Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_011055.1
Length=76312
Score E
Sequences producing significant alignments: (Bits) Value
seq785 156 2e-33
>seq785
Length=396209
Score = 156 bits (172), Expect = 2e-33
Identities = 422/638 (66%), Gaps = 21/638 (3%)
Strand=Plus/Plus
Query 65086 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTG 65145
||||||||| | ||||||| ||| | || ||| || | || | |||||| |
Sbjct 355069 ACCGGCTCTTTGTCTCTGGATATCGCGTTAGGTGCCGGTGGTTTACCAATGGGCCGTATC 355128
Query 65146 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 65205
|| ||||| ||||| ||||||||||| || || | || ||| | | || | | ||
Sbjct 355129 GTTGAAATTTACGGACCAGAATCTTCCGGTAAAACCACGCTGACTTTGCAAGTTATCGCA 355188
Query 65206 AATGCGCAGAAGGCCGGTGGCAACGCC---GCCTACATCGACGCTGAGCACTCCCTGGAC 65262
|| ||| || ||||| || || | |||||| || |||||| | ||||||
Sbjct 355189 GCAGCACAGCG---CGAAGGCAAAACCTGTGCGTTCATCGATGCAGAGCACGCACTGGAC 355245
Query 65263 CCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGT-TCAGCCGGA 65321
|| ||||| || || || || || |||| ||||| || || | |||||| ||
Sbjct 355246 CCGATCTACGCTAAAAAACTGGGCGTAGATATCGATAACCTGCTG-TGTTCTCAGCCAGA 355304
Query 65322 CACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCA- 65380
||||| || ||||| ||||| ||| |||| || | || |||| |||| |
Sbjct 355305 TACTGGTGAACAGGCTCTGGAAATCTGTGACGCGCTGACCCGTTCAGGCG--CTGTTGAC 355362
Query 65381 -TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATC 65439
| || |||||||||| ||||| || ||| ||| || || |||||||||| ||
Sbjct 355363 GTGATCATCGTTGACTCCGTGGCTGCACTGACACCGAAAGCAGAAATCGAAGGCGAAATT 355422
Query 65440 GGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACT 65499
|| ||| |||| | ||||| || || | ||| ||||| ||||| ||||| |
Sbjct 355423 GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCC 355482
Query 65500 GGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 65559
|| | | | | | ||||||| ||| ||| |||||||| | || ||| ||
Sbjct 355483 GGTAACCTGAAAAACGCCAACACACTGCTTATCTTCATCAACCAGATCCGTATGAAAATT 355542
Query 65560 GGCAACGTGGGCTACGG---CCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTC 65616
|| ||| | ||| |||| || |||||||| ||||| || || ||| |||
Sbjct 355543 GGT---GTGATGTTCGGTAACCCG---GAAACCACCACCGGCGGTAACGCGCTGAAATTC 355596
Query 65617 TACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCT 65676
|||||||| || || ||||| ||||||| |||| | | || ||||| |||| || |
Sbjct 355597 TACGCCTCTGTGCGTCTGGATATCCGTCGTATCGGCGCGATTAAAGAAGGTGATGTGGTT 355656
Query 65677 GTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAA 65714
||||| | | || || ||||| || || ||||||||
Sbjct 355657 GTCGGTAGCGAAACGCGTGTGAAAGTGGTGAAGAACAA 355694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 243868843148402
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |