Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq785 129 3e-25 >seq785 Length=396209 Score = 129 bits (142), Expect = 3e-25 Identities = 294/438 (67%), Gaps = 11/438 (3%) Strand=Plus/Plus Query 66114 CTCGGGGTGGATGTCGACAATCTCGTG-GTTGTGCAGCCAGACACTGGCGAGCAGGCCCT 66172 || || || ||| |||| || || || ||| | |||||||| ||||| || ||||| || Sbjct 355264 CTGGGCGTAGATATCGATAACCTGCTGTGTTCT-CAGCCAGATACTGGTGAACAGGCTCT 355322 Query 66173 GGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGT 66232 ||| ||| |||| || | || |||| ||| | | ||| | || ||||| || Sbjct 355323 GGAAATCTGTGACGCGCTGACCCGTTCAGGCGCTGTTGACGTGATCATCGTTGACTCCGT 355382 Query 66233 GGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCT 66292 ||| || ||| ||| || || ||||||| || || || ||||| ||| | ||||| Sbjct 355383 GGCTGCACTGACACCGAAAGCAGAAATCGAAGGCGAAATTGGTGACTCTCACATGGGCCT 355442 Query 66293 GCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAA 66352 || || ||||| ||||| ||||| |||||| |||| | | | | |||| Sbjct 355443 CGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCCGGTAACCTGAAAAACGCCAA 355502 Query 66353 CACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCAACGTGGGCTACGG--- 66409 ||| || | | | || ||| | || ||| || || ||| | ||| Sbjct 355503 CACACTGCTTATCTTCATCAACCAGATCCGTATGAAAATTGGT---GTGATGTTCGGTAA 355559 Query 66410 CCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGA 66469 |||| || ||||||||||| ||||| || ||| ||||||||||| |||||| |||| Sbjct 355560 CCCG---GAAACCACCACCGGCGGTAACGCGCTGAAATTCTACGCCTCTGTGCGTCTGGA 355616 Query 66470 TGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGT 66529 | |||| | |||| | | || ||||| |||| || |||||| | | ||||| || Sbjct 355617 TATCCGTCGTATCGGCGCGATTAAAGAAGGTGATGTGGTTGTCGGTAGCGAAACGCGTGT 355676 Query 66530 GAAGGTTGTCAAGAACAA 66547 ||| || || |||||||| Sbjct 355677 GAAAGTGGTGAAGAACAA 355694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242266988095928