Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq35 383 2e-101
>seq35
Length=455554
Score = 383 bits (424), Expect = 2e-101
Identities = 661/949 (70%), Gaps = 16/949 (2%)
Strand=Plus/Minus
Query 155935 GCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACC 155994
||||||||||||||| | ||||| || ||| || ||||||||||| |||||
Sbjct 13182 GCCATCAACTGGAACAAAATCCAGGACGATAAAGACCTCGAAGTGTGGAACCGCCTGACG 13123
Query 155995 AACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCAG 156054
|| |||||||||||||| ||| | ||| |||| || || | | ||||||| |
Sbjct 13122 TCGAATTTCTGGCTGCCGGAAAAGGTGCCGTTGTCGAACGATATTCCGTCGTGGGCGACG 13063
Query 156055 CTGACCG---AGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTG 156111
|| | || ||||| | | |||| | || || || || |||||||||||| |||||
Sbjct 13062 CTCAGCGCGCAGGAAAAACAACTGA---CGATCCGCGTATTTACCGGCCTGACGCTGCTG 13006
Query 156112 GACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCAC 156171
|| ||| | || | |||||||| |||| || || || | || || |||
Sbjct 13005 GATACCGTGCAAAACGTGGTCGGCGCACCGACGCTGATGAAAGATGCGGTGACGCCACAC 12946
Query 156172 GAGGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCG-TGCACGCACGCAGCTACTC 156230
|| || ||||| ||| | || ||| || ||||| |||| |||| || || || |
Sbjct 12945 GAAGAAGCGGTTTACTCGAATATCTGCTTTATGGA-AGCGGTGCATGCGCGTTCTTA-TA 12888
Query 156231 GAACA-TCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGG 156289
| || | ||||||||||||||| ||||| ||| | || | || | ||||||| |
Sbjct 12887 GTTCAATTTTCTCGACGCTGTGCGCCACCGTGGACGTGGATGAAGCCTACCGCTGGAGCG 12828
Query 156290 AGGAGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACG 156349
|||| |||| | ||||| || || || | |||| | | || ||| |||| || |
Sbjct 12827 AGGAAAACGTCGCGCTGCAAAATAAAGCGGCGATCATTTTGTCGTATTACGACGGCGAAG 12768
Query 156350 ACCCGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCT 156409
| ||||| | | || |||||| | | | || ||| |||||||||||| ||| |
Sbjct 12767 ATCCGCTGATGAAGAAAGTCGCCAGCGTGTTCCTTGAGTCGTTCCTGTTCTACTCCGGTT 12708
Query 156410 TCTACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGATCC 156469
| || |||||||||| ||||||| || | |||||||||||||||||| || ||||||
Sbjct 12707 TTTATCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTCACCAACACCGCGGATCTGATCC 12648
Query 156470 GGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGG 156529
| || |||||||| ||||| || || ||||| |||||||||||||| || |||||||| |
Sbjct 12647 GTCTGATCATCCGTGACGAAGCGGTTCACGGTTACTACATCGGCTATAAATTCCAGAAAG 12588
Query 156530 GCCTGGAGAAGGAGACCAAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAGCTGC 156589
|||| ||| | | | | || |||| | ||||||| | | | ||| |||
Sbjct 12587 CGCTGGCACTGGAAAGCGAAGAGCGTCAGCGTCAGATCAAGGAGCAGGCGTTTGATCTGA 12528
Query 156590 TGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGCC 156649
| || ||| |||||||||| |||||| | || || || |||| |||
Sbjct 12527 TTCAGGATTTGTACGACAACGAGATCCGCTACACCGAAGAACTGTATGACGGTGTAGGCT 12468
Query 156650 AGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTGG 156709
|| ||| ||||||||||| ||||||| ||||||| |||||| || ||| ||| || |
Sbjct 12467 GGAGCGAAGACGTGAAGAAATTCCTGCATTACAACGCCAACAAAGCGCTGATGAATCTCG 12408
Query 156710 GCTACGACGCGCTGTT--CAGCCGCAGCGACTGC-GACGTCAACCCGGCCATCCTGAGCG 156766
||||||| || ||||| |||| |||| | || || || || ||||| ||||| ||
Sbjct 12407 GCTACGAAGCCCTGTTCCCAGC--CAGC-ATGGCGGATGTGAATCCGGCGATCCTCTCCG 12351
Query 156767 CGCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTACG 156826
| | ||||| | ||||| ||||||||||||||||| || || || | |||| |
Sbjct 12350 CATTATCGCCAAACGCCGACGAAAACCACGACTTCTTCTCCGGATCCGGATCCTCGTATG 12291
Query 156827 TCATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTTCTGATG 156875
| || | ||| | || ||||||||||| |||||||| ||||||||
Sbjct 12290 TGATCGGCAAAGCCGTCAATACCGAAGACGAGGACTGGGATTTCTGATG 12242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526145301571680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |