Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_011551.1 Length=39867 Score E Sequences producing significant alignments: (Bits) Value seq725 141 2e-29 >seq725 Length=236385 Score = 141 bits (156), Expect = 2e-29 Identities = 208/290 (72%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 25685 CTTCTAAGCCGTAGGTCACTGGTTCGAATCCAGTAGGGCGTACCAAT-AAAATCAAGGGG 25743 ||||||||||||||||||| ||||||| || ||||||||||||| | |||| ||| Sbjct 175387 CTTCTAAGCCGTAGGTCACAGGTTCGAGCCCTGTAGGGCGTACCATTCAAAAACAATCAC 175446 Query 25744 TTACGTAGTT-TTGTCTCCTAGGAATTATTTAAAAGTGC--CAGATTAGTGACATCGTTT 25800 ||| | || |||| ||| ||| ||| |||| |||||| | |||| Sbjct 175447 TTAGCTGTTTGTTGTTCCCTCCGAA--ATTAGCGAGTGGGACAGATTTGGGACAGAAACC 175504 Query 25801 GCCAACGCCTCGTCAATTTTCTTGGCATGCTCAGTCAGGTGGCTGGGCGAAAGGTGTGCG 25860 | || |||| || | ||| || ||||| || | || | |||| || || ||| Sbjct 175505 CCAAAAATAGCGTCTATCTGCTTCGCGTGCTCCGTTAAATGATTCGGCGCCAGATGCGCG 175564 Query 25861 TAACGACGTACCATTTCGATAGATTCCCAGCCGCCCATTTCCTGCAAAACAGAGAGTGGA 25920 || || |||||||| ||||| || |||||||||||||||||||| | ||| || | || Sbjct 175565 TATCGCCGTACCATCTCGATCGACTCCCAGCCGCCCATTTCCTGAAGAACTGACAACGGG 175624 Query 25921 ACACCTGATTGTATCAGCCAACTTGCCCAAGTATGTCTAAGATCATGAAA 25970 ||||| | || |||||||| |||||||| || ||||| || || ||||| Sbjct 175625 ACACCGGCCTGAATCAGCCAGCTTGCCCATGTGTGTCTCAGGTCGTGAAA 175674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127348619603332