Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq223 167 2e-36
seq8056 120 3e-22
seq15643 104 2e-17
seq4062 96.9 3e-15
seq8521 95.1 1e-14
seq48539 91.5 1e-13
seq742 84.2 2e-11
>seq223
Length=511576
Score = 167 bits (184), Expect = 2e-36
Identities = 326/476 (68%), Gaps = 12/476 (3%)
Strand=Plus/Minus
Query 22322 TATTTTGTCGAGTGGGGAGTGTACCTTCGCCAGTTTCCCGCCGACAAGGTGCCCGTGCCG 22381
|||||||| |||||||| ||||| |||| || ||| || || | || | || |
Sbjct 113967 TATTTTGTTGAGTGGGGCGTGTATGGTCGCGGATTCTCCGTGGATAAAATCCCTGCGCAG 113908
Query 22382 AACCTGTCGCATTTGCTCTACGGTTTCGTGCCAATATGCGGCGGAGACGGCATCAACGAC 22441
|||||| | ||| | | ||||| ||| ||| || |||||||| ||||| || ||||||
Sbjct 113907 AACCTGACACATATCTTGTACGGCTTCACGCCGATTTGCGGCGGGGACGGGATTAACGAC 113848
Query 22442 GCCCTGAAAACGGTGCCGGGAAGCTTCGAGGCGTTGCAACGGTC--GTGCGTCAATAGAG 22499
| |||| | ||| || || |||| |||||||| | ||||| ||
Sbjct 113847 AGTTTAAAAAGCATTGAGGGCAGTTTTCAGGCCTTGCAACGCGCCTGTGCGGGGCGTCAG 113788
Query 22500 CCGATTTCAAGGTGACCATACACGATCCGTGGGCGGCCGTACAAAAACCTCAAAAAGGCG 22559
||||| || || | ||||||||||| ||||| || || || | ||||| ||||||
Sbjct 113787 --GATTTTAAAGTTGCGATACACGATCCCTGGGCTGCGGTGCAGATGCCTCAGCAAGGCG 113730
Query 22560 T--GTCGTCGTGGAACGAACCGTACAAAGGCAACTTTGGTCAATTGATGGCAGTGAAAAG 22617
| || | | | ||| || ||||| || |||||||| ||||||| ||||||
Sbjct 113729 TCAGTGAATATTCAGC--ACCTTATAAAGGTAATTTTGGTCAGCTGATGGCGCTGAAAAA 113672
Query 22618 AGCGAATCCTCATCTCAAAGTGTTAGCATCGATCGGCGGATGGACGTTGTCCGATCCGTT 22677
||| |||| | || ||| | | | || ||||| || ||||||||||| || |||||
Sbjct 113671 AGCCTATCCAAACCTGAAAATTGTCCCTTCCATCGGTGGCTGGACGTTGTCAGACCCGTT 113612
Query 22678 TTATCATATGCACGACAAG--AACGTGAGACAAATTTTCATCGATTCGGTGGAAGAGTAT 22735
||| ||| | || ||| | | | ||| | ||| | | ||||| |||| |
Sbjct 113611 CTATTTCATGAAGGATAAGGCGAAGCGGGAC--GTCTTCGTAGCCTCGGTAAAAGAATTC 113554
Query 22736 TTGATCACGTGGAAGTTCTTTGACGGCGTCGATATTGATTGGGAGTTTCCCGGCGG 22791
|| || ||||||||||||||||| || |||||||| ||||| ||||| |||||
Sbjct 113553 CTGCAAACCTGGAAGTTCTTTGACGGTGTGGATATTGACTGGGAATTTCCGGGCGG 113498
>seq8056
Length=34938
Score = 120 bits (132), Expect = 3e-22
Identities = 153/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
||||||||| | || ||||| || || |||||||||||| | |||||| ||| ||
Sbjct 32112 CACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCGGAAAGGGTGCGACCATCTTC 32053
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
|| |||||||||||| |||| | || || ||||| ||||| || || || |||||
Sbjct 32052 TAATTGTTTTCCAGCGAAGATAAGACGTTGTTGATCCGGAGGAATTCCTTCTTTGTCTTG 31993
Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
|||||| ||| | | ||||| || || | ||| || || | || | ||| ||
Sbjct 31992 AATTTTCGCCTTTACATTTTCGATCGTATCTGAGGGCTCAACCTCCAATGTGATCGTCTT 31933
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
||||||| |||||| || ||||||||||||
Sbjct 31932 TCCGGTCAAAGTTTTCACGAAAATCTGCATG 31902
>seq15643
Length=27379
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| || || | ||| | ||| || || | || ||||| || || |||||||||||
Sbjct 12273 CCTCCTCGGAGTCGAAGCACTAAGTGAAGTGTGGACTCCTTCTGGATATTGTAATCTGAA 12214
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||||||||| ||| ||||||| | ||||||||| |||||
Sbjct 12213 AGGGTACGTCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGAGGG 12154
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || || ||||| ||| || |||| | ||||| ||||| | ||| ||
Sbjct 12153 ATTCCTTCTTTGTCTTGGATCTTGGCTTTGACATTTTCGATAGTGTCAGAGGGCTCTACC 12094
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | ||||| || || || || || || |||||||||||
Sbjct 12093 TCAAGGGTGATGGTTTTCCCCGTAAGGGTCTTCACGAAAATCTGCAT 12047
>seq4062
Length=67394
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
||||||||||| | | || ||||| || | || ||||| || || || ||||| ||
Sbjct 48393 GCTCCACCGCGAAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCC 48334
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| || | ||| || ||||| || || ||| |||||| | |||||| || ||
Sbjct 48333 GAAAGTGTCCTGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGG 48274
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| || ||| || ||||| ||||||| |||||| | | |||
Sbjct 48273 GGGATTCCTTCCTTATCTTGGATCTTGGCCTTGACATGTTCGATGGTGTCAGAAGGCTCC 48214
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| |||| ||| | || ||||| || || || || || || |||||||||
Sbjct 48213 ACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 48163
>seq8521
Length=40141
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
||||||||||| || || ||||| || | || || ||| || ||||| |||||
Sbjct 2671 GTAGACTCTTTCTGGATGTTGTAGTCAGAAAGGGTACGTCCATCTTCCAGCTGCTTTCCG 2612
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| ||||||| | ||||||||| || || || || |||||||| ||| || |||
Sbjct 2611 GCGAAGATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGCCTTA 2552
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || |||| ||| | || || || ||||||||
Sbjct 2551 ACATTCTCTATGGTGTCGGAGGGCTCAACCTCGAGGGTGATTGTCTTCCCAGTCAGAGTC 2492
Query 127097 TTTACAAAAATCTGCAT 127113
|| || || ||||||||
Sbjct 2491 TTGACGAAGATCTGCAT 2475
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | || | ||||| || | || ||||||||||| || ||||| |||
Sbjct 2930 TCCACCACGCAGACGGAGGACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAGTCGGA 2871
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || || ||| || | || ||||| || ||||||| | ||||||||| || ||
Sbjct 2870 AAGGGTACGTCCATCTTCCAATTGCTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGG 2811
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || ||||| ||| ||| || || | | || | ||||| | ||| ||
Sbjct 2810 GATACCTTCCTTATCCTGGATCTTGGCTTTCACATTCTCAATTGTGTCTGAGGGCTCAAC 2751
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || |||||||| ||||| ||||| ||||||||
Sbjct 2750 CTCTAGGGTGATGGTCTTCCCGGTCAGGGTTTTGACAAAGATCTGCAT 2703
>seq48539
Length=7100
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | || || || ||||| |||||||||||| | || || || ||
Sbjct 6468 CACCAAGTGGAGGGTGGATTCCTTTTGGATATTGTAATCGGAGAGGGTTCGGCCGTCTTC 6409
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
| ||| || |||||| | |||| | ||||||||| ||||| || || || ||||| |
Sbjct 6408 CAACTGCTTGCCAGCGAAAATCAGCCTCTGCTGATCTGGAGGGATACCTTCTTTGTCT-T 6350
Query 127024 GATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
|| ||| ||| || | | ||| | || || | | ||| || || | || | ||| |
Sbjct 6349 GAATTTTTGCCTTCACGTTTTCAATCGTATCGGAAGGCTCCACCTCCAAAGTTATCGTCT 6290
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|||| |||| ||||| || ||||||||||||
Sbjct 6289 TGCCAGTCAAGGTTTTCACGAAAATCTGCATG 6258
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | || | ||||| || | || ||||| |||||||| ||||| ||
Sbjct 6942 TCCACCACGCAGACGGAGGACCAAGTGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGA 6883
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || || ||| || | || ||||| || ||||||| | ||||||||| || ||
Sbjct 6882 AAGGGTACGTCCATCTTCCAATTGCTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGG 6823
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || |||||||| || || ||| | | ||| | ||| || | || ||
Sbjct 6822 AATTCCTTCCTTGTCTTGAATCTTAGCCTTAACATTTTCAATGGTATCTGAGGGTTCAAC 6763
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | ||| | |||||||| || || || || ||||||||||||||
Sbjct 6762 TTCCAAGGTGATGGTTTTGCCAGTAAGGGTCTTGACAAAAATCTGCAT 6715
>seq742
Length=196864
Score = 84.2 bits (92), Expect = 2e-11
Identities = 129/183 (70%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 146629 TTGACGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACA 146688
||||| |||||||||||||| || || || || || || ||| || | ||
Sbjct 48018 TTGACAGCGATAGAGGCCAAATTGCAGACAGCTACTTCATCTTTGGAAGTGTATTCAACT 47959
Query 146689 ATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTT- 146747
|| || | ||||||||| |||||||| || | |||| ||||| |||||| || |||
Sbjct 47958 ATTTCTGTGCAGAGGTTACTGCACTTAATAGTTCCCAGATTTTGTTGGTTGCT---CTTT 47902
Query 146748 --GTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACG 146805
|||||| | ||||||||| |||||||| || || ||||| || | | |||| |
Sbjct 47901 CGGTTGCACGCGTCCTTGTACAGCATGTAGGGGGTTCCCGTTTCTACTTGAGATTCGATG 47842
Query 146806 ATG 146808
|||
Sbjct 47841 ATG 47839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475091667224160
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