Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_012223.2 Length=44899 Score E Sequences producing significant alignments: (Bits) Value seq725 87.8 5e-13 >seq725 Length=236385 Score = 87.8 bits (96), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 20811 ATCAAGGACGCGACTATTAACTTCGCGCAGATCACGGACACGCTGCAATCGAATAACTAT 20870 ||| |||||| ||| |||| | ||| ||||| || | || |||||||||| | Sbjct 217609 ATCCAGGACGGGACGATTACCAATGCGAAGATCGGCAACTTCATTCAGTCGAATAACTTT 217668 Query 20871 GACGGCAACACGCGTGGTTGGCGCTTAGGGAAAGAGGGGACGTTTATCAACCTGGGAACC 20930 ||||| |||| || |||| ||| | ||| || |||||||||||||| || | | Sbjct 217669 GACGGTTCAACGCAGGGCTGGCAATTAAGTAAATCTGGTACGTTTATCAACCTTGGGAAC 217728 Query 20931 GGTAACGGC---GGCGGGATGAAACAGACGAACACGCAAATCAGCGTTAGGGACGGAAAC 20987 | | |||| || | |||||||||||||| || ||||| || ||||| ||| Sbjct 217729 GCTGGCGGCGCTGGTGCAATGAAACAGACGAATACCACGATCAGTACTAAGGACGATAAC 217788 Query 20988 GGCGTGCTCCGCGTGCA 21004 || ||||| |||||||| Sbjct 217789 GGGGTGCTTCGCGTGCA 217805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143437857441188