Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq223 84.2 9e-12 >seq223 Length=511576 Score = 84.2 bits (92), Expect = 9e-12 Identities = 216/328 (66%), Gaps = 11/328 (3%) Strand=Plus/Minus Query 9119 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 9178 ||| |||||||| || |||||||| ||||| || ||||||||| ||||||| | || Sbjct 459873 CGTAAACAAAGTTATTCTCGTCGGTAATCTGGGACAAGACCCGGAAGTCCGCTACATGCC 459814 Query 9179 GAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAAGGACAAGGC 9238 | ||||| ||| | |||| ||| ||| || ||| | || ||| ||||| || Sbjct 459813 TAACGGCGGCGCGGTTGCCAACATCACTCTGGCAACGTCTGAGAGCTGGCGTGACAAAGC 459754 Query 9239 GAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCGGCCGCCTCGC 9298 | ||||||| || ||| || || |||||||| || | || |||||| | || Sbjct 459753 CACCGGCGAGCAGAAAGAAAAAACGGAATGGCACCGTGTGGTGTTGTTCGGCAAATTAGC 459694 Query 9299 CGAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCTACATCGAGGGGCGCA-TCA 9357 || ||| | ||| |||| || || | |||||||||||| || |||| | Sbjct 459693 AGAAGTCGCAGGCGAATACCTGAAGAAAGGTTCTCAGGTCTACATCGAAGG-CGCACTGC 459635 Query 9358 AGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGTCGC-- 9415 | || || || ||| ||||| | ||| || ||||| ||||| |||||| Sbjct 459634 AAACCCGTAAATGGACCGATCAGGCTGGCGTTGAAAAATACACCACCGAAGTCGTCGTTA 459575 Query 9416 -------CGACAGGATGCAGATGCTCGG 9436 || || |||||||||||||| Sbjct 459574 ACGTGGGCGGCACCATGCAGATGCTCGG 459547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200394944648424