Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq8056 87.8 1e-12 >seq8056 Length=34938 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| ||||| | ||| || |||||||| | || || || || ||||| ||||||| Sbjct 32130 GCCTCCTCGGAGACGGAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCGGA 32071 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 | ||| |||| || |||||||| || | || || | ||| || ||||||| || Sbjct 32070 AAGGGTGCGACCATCTTCTAATTGTTTTCCAGCGAAGATAAGACGTTGTTGATCCGGAGG 32011 Query 39612 TACGCCTTCTTTGTCGCATATTTT-TTGTTTA-ATCGTCGCTACTGTGTCTGCGCTTTCC 39669 | ||||||||||| ||||| |||| || ||| | || |||| | || Sbjct 32010 AATTCCTTCTTTGTCTTGAATTTTCGCCTTTACATTTTCG--ATCGTATCTGAGGGCTCA 31953 Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || ||||| || || || || || || |||||||| ||||| ||||||||| Sbjct 31952 ACCTCCAATGTGATCGTCTTTCCGGTCAAAGTTTTCACGAAAATCTGCATG 31902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347078186649122