Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_014036.1
Length=174436
Score E
Sequences producing significant alignments: (Bits) Value
seq828 163 3e-35
seq785 132 5e-26
seq35 125 8e-24
>seq828
Length=218660
Score = 163 bits (180), Expect = 3e-35
Identities = 150/190 (79%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 51218 GTGGAAGGTGGACAGCATTTAAACGTAAACGTGTTGCGCCGCGAAACTCTCCTGGATGCG 51277
||||||||||| ||||| | ||||| ||||| |||| || ||||| || ||||||
Sbjct 42316 GTGGAAGGTGGTCAGCACCTGAACGTTAACGTACTGCGTCGTGAAACACTGGAAGATGCG 42257
Query 51278 GTTGAACATCCTGAAAAATACCCACAGTTAACGATCCGTGTTTCTGGTTATGCAGTGCGT 51337
||| |||||||||| |||||||||||| | || || ||||| ||||| ||||| || |||
Sbjct 42256 GTTAAACATCCTGAGAAATACCCACAGCTGACTATTCGTGTGTCTGGCTATGCGGTACGT 42197
Query 51338 TTTAACTCACTGACCCCTGAACAGCAACGCGACGTTATCGCCCGAACCTTTACAGAGAGT 51397
|| ||||||||||| |||||||||| || ||||| || |||| || || || || ||
Sbjct 42196 TTCAACTCACTGACTGCTGAACAGCAGCGTGACGTGATTACCCGTACTTTCACTGAAAGC 42137
Query 51398 CTATAATGGC 51407
|| |||| ||
Sbjct 42136 CTGTAATCGC 42127
>seq785
Length=396209
Score = 132 bits (146), Expect = 5e-26
Identities = 712/1116 (64%), Gaps = 59/1116 (5%)
Strand=Plus/Minus
Query 153492 GATGCGTTCCAGTCATACGAATATGAAGTAAACACCTTACATACTGCAAATGGACAGACG 153551
|| || |||||||| |||||||| || || || | || || || || || ||||||
Sbjct 142691 GACGCCTTCCAGTCGCTGGAATATGAGGTTAATACGCTGCACACCGCCAACGGCCAGACG 142632
Query 153552 CCTTTTGTCACGATCACTTTCGGTATGGGTACTGGTTGGCGCGAA---CGCATGATCCAG 153608
|| |||||||| || ||| || | || || ||| ||| ||| ||||||||
Sbjct 142631 CCGTTTGTCACCTTCGGTTTTGGCCTCGGCACATCCTGG---GAATCGCGCCTGATCCAG 142575
Query 153609 AAAGCAATTCTGAAAAACCGTATTCGTGGACTGGGTAAAAAAGGCATTACTCCTGTATTC 153668
|| |||||||| ||||| ||| |||||||| ||||| ||| || ||||||||
Sbjct 142574 CAATCAATTCTGCGTAACCGCATTGCCGGACTGGGCAAAAATCGCAAAACCGCTGTATTC 142515
Query 153669 CCAAAACTGGTTATGTTT---ATGGAAAAAGGGATTAACCTTAATCCGGAAGACAGAAAC 153725
|||||||||| ||||| || | || | || | ||| | | ||| |||
Sbjct 142514 CCAAAACTGG---TGTTTGCCATCCGTGACGGCCTGAATCATAAAGCCGGTGACGCCAAC 142458
Query 153726 TATGATATTAAGAAATTGGCCCTGGAATGTTCTTCAAAGCGTATGTATCCGGATAT---- 153781
|| || || ||| || |||| |||||||| | ||||||||||| ||||| ||
Sbjct 142457 TACGACATCAAGCAACTGGCACTGGAATGCGCCAGCAAGCGTATGTACCCGGACATCCTC 142398
Query 153782 TATTA-GCGCGGCTAATAACCGTCGTATTACTGGCTCTAGCATTCCTGTATCTCCTATGG 153840
|||| | | | | | | ||| || || | | ||| | | || ||||
Sbjct 142397 AATTATGATCAGGTGGTGAAAGTC-----ACAGGTT----CGTTC--AAAACGCCGATGG 142349
Query 153841 GTTGTCGTAGTTTCCTTAGCGTGTGGAATGATGAGCACGGTAATGAAATTCTTGATGGAC 153900
| || || |||||||| |||||| |||| || | || | || | || || |
Sbjct 142348 GCTGCCGCAGTTTCCTGGGCGTGT---ATGAAGAAAATGGCGAGATGATCCACGAGGGCC 142292
Query 153901 GTAATAACCTGGGCGTTGTGACAATCAACCTTCCTCGTATTGCGATTGAAGCCGAAGCAC 153960
| ||||| | ||||| | | | || || || ||||||||| | |||| |||| | |
Sbjct 142291 GCAATAATATCGGCGTGATCAGCCTGAATCTGCCGCGTATTGCGCTGGAAG-CGAACCGC 142233
Query 153961 AGGAAGATGAAGACGCGCATGATGCATTTTGGCGTATCCTTGATGAACGTCTGGAACTGT 154020
|| |||| || || || ||| | || || || ||| || |||
Sbjct 142232 -----GACGAAG-CG--------GCGTTCTGGGCACTGCTCGACGAGCGTTTGCTGCTG- 142188
Query 154021 GCTTTG-AAGCCCTGATGACTCGTATCGATAGCCTACGCGGTGTTAAAGCCAGTGTAGCC 154079
|| | |||| |||||||| || || | | || || | |||||| | || ||
Sbjct 142187 GCGAAGAAAGCGCTGATGACCCGCATTGCACGTCTGGAAGGCATCAAAGCCCGCGTGGCG 142128
Query 154080 CCGATCCTTTATACAGAAGGTGCGTTTGGTGTAAGGTTGAAACCCGATGATGA-AATTCT 154138
|| ||||| || | |||||||||| ||||| | ||||| | || || || | |||
Sbjct 142127 CCAATCCTGTACATGGAAGGTGCGTGCGGTGTGCGCCTGAAAGCTGACGACGATATTTCC 142068
Query 154139 GGAACTGTTCAAAAATGGACGCAGTTCTATCAGTCTGGGATACATCGGATTGCATGAAAC 154198
|| | | ||||||||||| || || || || |||||||| || ||||||||||
Sbjct 142067 GGCA-TCTTCAAAAATGGCCGTGCCTCGATTTCGCTCGGATACATTGGCGTGCATGAAAC 142009
Query 154199 TCTGA---TGCTTTTCGG-ATCTGGACAACACCCATTCGAC-CGGATCGGTTCTAAGAAC 154253
| | ||| ||||| | | ||| ||| |||||| | | | ||| |||
Sbjct 142008 CATTAACGCGCTGTTCGGCAACCAGAC-CCACGTGTTCGACGCCGGCCAGTTACGCGAAA 141950
Query 154254 ATGGGTAGACTGATTCTGGAATATCTACGCGCTGCGACCGAAGCATGGAAAAAGAAAACC 154313
| | || | |||| ||| ||| || || |||||| |||||| | ||||
Sbjct 141949 AAGCCGAGGC-GATTGTGGCTCGTCTGAAAGCGGCAACCGAAAGCTGGAAAGACGAAACG 141891
Query 154314 GGATTTGGGTTTAGTCTGTACTCAACCCCTGCTGAATCTCTATGTCATCGTTTCTGCAAA 154373
|| | || || || |||||| || || ||| || || | || |||||
Sbjct 141890 GGCTACGGTTTCAGCCTGTACAGCACGCCGAGCGAAAACCTGTGCGACCGCTTCTGTCGT 141831
Query 154374 CTGGACTATGAGAAATTCGGAAGTATCAAAGGGATCACAGATAAAGGCTGGTACACTAAC 154433
||||| | | ||||||| | || | || |||||||| | ||||| |||
Sbjct 141830 CTGGATAAAGCCGAATTCGGGCTGGTGGCCGGTGTGACTGATAAAGGTTACTACACCAAC 141771
Query 154434 AGTTTTCATCTGGACGTTGACCGCAAGGTAACACCGTTCGAGAAAATCGACTATGAAGCC 154493
|| || ||||||||||| || ||||||| |||| ||| ||| |||||| |||||
Sbjct 141770 AGCTTCCATCTGGACGTCGAGAAGAAGGTAAATCCGTACGAAAAACTCGACTTCGAAGCG 141711
Query 154494 GATTAT-CATTACATTGCAACTGCTGGACATATCAGCTATGTAGAATTCCCTGATATGAA 154552
||| | || ||||| || || ||| |||||| |||| |||| | || |
Sbjct 141710 CCGTATCCGCCACTCAGCAACGGC-GGTTTCATCTGCTATGGCGAATACCCTAACCTGCA 141652
Query 154553 AAACAACCTGGAAGCCCTTGAAAAAGTCTGGGATTA 154588
| |||| ||| |||| || ||| | || ||||||||
Sbjct 141651 ACACAATCTGAAAGCGCTGGAAGACGTGTGGGATTA 141616
>seq35
Length=455554
Score = 125 bits (138), Expect = 8e-24
Identities = 203/290 (70%), Gaps = 4/290 (1%)
Strand=Plus/Plus
Query 39960 GACCAGATAGCAAAAGTCATTGAACAACTGAAATCAACCCCAGACGATCGCG--GGATCA 40017
|||||| | ||||| || ||||||| ||||| | ||| ||| ||||| | || |
Sbjct 112455 GACCAGCTGGCAAATGTGGTTGAACAGCTGAAGAAAGACCCTGAC--TCGCGTCGTATTA 112512
Query 40018 TCGTTTCTGCCTGGAACCCTGTTGATCTTGATGATATGGCATTGCGTCCGTGTCACTGTT 40077
|||| ||||| |||||| | || || ||| | ||||| || || || ||| ||
Sbjct 112513 TCGTGTCTGCATGGAACGTGGGCGAACTGGATAAGATGGCGCTGGCACCTTGCCACGCTT 112572
Query 40078 TCTTTCAGTTCGTTGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCAGTTG 40137
|||| |||||| ||| | |||||||| |||| ||| ||| ||||| ||| |
Sbjct 112573 TCTTCCAGTTCTATGTGGCCGACGGTAAATTGTCCTGCCAGCTGTACCAGCGCTCATGCG 112632
Query 40138 ATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTATGCTCTCCTGACGCATATTATCG 40197
|| ||||| | || |||||||||||||||||| ||| || || ||| |||||| || |
Sbjct 112633 ATATCTTCCTCGGCTTGCCGTTCAATATCGCCAGCTACGCACTGCTGGTGCATATGATGG 112692
Query 40198 CTGATATTTGCGGGTACGAAGTGGGCGATCTGGTTTGGACTGGTGGTGAT 40247
| | |||| |||||||| ||| | || ||||| ||||| |||
Sbjct 112693 CGCAACAATGCGACCTTGAAGTGGGTGATTTTGTCTGGACGGGTGGCGAT 112742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557587025029440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |