Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_014636.1
Length=225268
Score E
Sequences producing significant alignments: (Bits) Value
seq785 262 6e-65
>seq785
Length=396209
Score = 262 bits (290), Expect = 6e-65
Identities = 1234/1925 (64%), Gaps = 75/1925 (4%)
Strand=Plus/Plus
Query 123218 CATATGTTTGACACGACGCTGGACTTCGTCCTGTTTGCCGACGTTAAATGCGCGAG-ATC 123276
|| |||||| | || |||| ||||| ||||| || ||| ||||||| | || | |||
Sbjct 141378 CAGATGTTTAATCCGGCGCTTCACTTCTTCCTGCTTACCGGCGTTAAACGGACGGGCATC 141437
Query 123277 CAGGGTTACCCAAATACCCACAGACGCGACGAATAACGTTCATCTT--ACGGTCATCGTG 123334
| ||| | || | ||| ||||| ||||| || | || || | ||| |||||
Sbjct 141438 C-GGGCTGCCGAGATAACCACACACGCGGCGGGTGACTGACACGCGGGAAGGT--TCGTG 141494
Query 123335 ATTGCCACACTTCGGACATTCGTATCCTTTAGAAGTAGCGGTA-AACTCACCGTTAAATC 123393
|||||| || |||||||| ||||||| || || | || || ||| || | |
Sbjct 141495 ATTGCCGCATTTCGGACAGGTAAATCCTTTGCTGGT-GCATTCGAATTCGCCGGTATAGC 141553
Query 123394 CACATTCAAAACAAACATCAACTGGAGTGTTTGTTCCATAGTACGGAGTGTTCCGATAAG 123453
| || || | || |||| | ||| ||||| || || || ||||| | ||||
Sbjct 141554 CGCAGTCGTAGCATTCATCGATTGGCGTGTTGGTGCCGTAATACGGCACGCGGGTATAAC 141613
Query 123454 CATAATCCCAAACTGCTTCGAGTGCTTCCAGATTGTGTTTCATATTCGGATATTCACCGT 123513
|||||||| || |||| || |||| ||||||||||| || || || ||||| || |
Sbjct 141614 TGTAATCCCACACGTCTTCCAGCGCTTTCAGATTGTGTTGCAGGTTAGGGTATTCGCCAT 141673
Query 123514 ATGAAATGAAACCACCGGTACTAAGCGGAATGAATTGCTTTTCAAAATCGATCTTGTCAT 123573
| | |||||||| ||| | || || || | || ||| || |||| || || |
Sbjct 141674 AGCAGATGAAACCGCCGTTGCTGAGTGGCGGATACGGCGCTTCGAAGTCGAGTTTTTCGT 141733
Query 123574 ACGGATTTGTGTTCATATCCACAGACAGATGGAAGCTGTTTGTGTAATAGTCTTTATCAA 123633
|||||||| ||| | || || ||||||||||||||| ||||| || ||||||||
Sbjct 141734 ACGGATTTACCTTCTTCTCGACGTCCAGATGGAAGCTGTTGGTGTAGTAACCTTTATCAG 141793
Query 123634 ACACCTTGTGCTC-ATACAGA-----GCGTGATCGATCTTAGCGAAACGATAACACAGAC 123687
||| | | | | | || || | ||| | | ||| || | |||||
Sbjct 141794 TCACACCGGCCACCAGCCCGAATTCGGCTTTATCCAGACGACAGAAGCGGTCGCACAGGT 141853
Query 123688 TTTCAGATGGAGTGCCATACAGACT-AAACGCCAGTCCAGTTTCTGCTTTCCACGCATTA 123746
|||| || |||| ||||| || |||| || || ||||| ||||||| || ||
Sbjct 141854 TTTCGCTCGGCGTGCTGTACAGGCTGAAACCGTAGCCC-GTTTCGTCTTTCCA-GCTTTC 141911
Query 123747 GCCATTTC---TTTCATGCGAG--ACAATACGTC-CAGCAAGAATGCTTGTTTCTCGGCG 123800
| || | ||||| |||| ||||| || | | || || || || | ||
Sbjct 141912 GG--TTGCCGCTTTCAGACGAGCCACAAT-CGCCTCGGCTTTTTCGC--GTAACTGGCCG 141966
Query 123801 TTTTCCATAACGTGCGATTCATCGTTGAAC------TTGATGATCTCAGATACTTCATGC 123854
|| | ||||| | | | | |||| || ||| | |||||||
Sbjct 141967 GCGTCGAACACGTGGGTCTGGTTGCCGAACAGCGCGTTAATGGT---------TTCATGC 142017
Query 123855 AATCCAATATAGCCAATGCTAACAGATGCGCGACCATTTTCAAA--TGCTTTCATGATGT 123912
| ||||| || || | || || || || ||||||| || ||| | || |
Sbjct 142018 ACGCCAATGTATCCGAGCGAAATCGAGGCACGGCCATTTTTGAAGATGCCGGAA--ATAT 142075
Query 123913 CATCATTTGGTTTCAGACGAACACCACAAGCACCTTCAACATAAAGAATCGGAGCAACGC 123972
| || | | |||||| || ||||| || |||||||| | || || || || || ||||
Sbjct 142076 CGTCGTCAGCTTTCAGGCGCACACCGCACGCACCTTCCATGTACAGGATTGGCGCCACGC 142135
Query 123973 TTGCCTTGACACCACGCAGACGATCAACGCGAGTCAACAAAGCTTTCTTAACGATTTCCA 124032
|| |||| || |||||| ||| ||| |||| || |||||||| | | ||
Sbjct 142136 GGGCTTTGATGCCTTCCAGACGTGCAATGCGGGTCATCAGCGCTTTCTTCGCCAGCAGCA 142195
Query 124033 TACGCTCTTCCAGAATTTCAAAGAAGCGCATTTGATTGCCGTTTGCGTCGAGTGCGATAC 124092
|||||| || || | | | |||| | || | || ||| || || || || ||||
Sbjct 142196 AACGCTCGTCGAGCAGTGCCCAGAACGCCGCTTCGTCGCGGTTCGCTTCCAGCGCAATAC 142255
Query 124093 GCGGCAAGTTCAGAGTAACAACACCGAGATTGTTTCTGCCTTCATGAA-CTTCATTACCG 124151
|||||| ||||| | | || |||| ||| || | ||| || || | | || | ||
Sbjct 142256 GCGGCAGATTCAGGCTGATCACGCCGATATTATTGCGGCCCTCGTGGATCATC-TCGCCA 142314
Query 124152 GTTTCGTCTTCCCAGCGATGCAAGAAACTACGGCATCCCATAGGGAACTTAAAGCTACCA 124211
|||| || | | || || |||||| ||||| ||||| || || || |||
Sbjct 142315 TTTTCTTCATACACGCC---CAGGAAACTGCGGCAGCCCATCGGCGTTTTGAACGAACCT 142371
Query 124212 GTCACTTCTACCACTTTATCATAACTCAAGATGTCTGGATACATACGCTTGGCAGCGCAC 124271
|| |||| ||||| | ||||||| | | |||||| || |||||||||||| |||||
Sbjct 142372 GTGACTTTCACCACCTGATCATAATTGAGGATGTCCGGGTACATACGCTTGCTGGCGCAT 142431
Query 124272 TCCAGTGCCATCTGTTTGATACGATACAGAGGATCAGTTGGTTTCAAGTTGTGTCCGTCT 124331
|||||||||| || ||||| || | ||| | ||| || | |||||
Sbjct 142432 TCCAGTGCCAGTTGCTTGATGTCGTAGTTGGCGTCACCGGCTTTATGATTCAGGCCGTCA 142491
Query 124332 TTCAGCGCGAAAACAAGTTTCGGGAAAACGGGAGTAATACCTTCTTTGCCAAGACCTTTC 124391
| || || || ||||| ||||| || | || | | | |||||| || ||
Sbjct 142492 CGGATGGCAAACACCAGTTTTGGGAATACAGCGGTTTTGCGATTTTTGCCCAGTCCGGCA 142551
Query 124392 ATCCGAACTTTCAGAATTGCTTCCTGAATGAGTTCGGATTCCCAGCTAGTGCCTAGTCCA 124451
|| || |||||||| || ||| || || ||||||||| ||||| || |||
Sbjct 142552 ATGCGGTTACGCAGAATTGATTGCTGGATCAGGCGCGATTCCCAGGATGTGCCGAGGCCA 142611
Query 124452 AACCCGAAAGTGCAGAATGGAGTTTGACCATTTGCCGAGTGCAGAGTGTTTACCTCATAC 124511
|| ||||| ||| || || || || || || || | |||||| || || ||||||||
Sbjct 142612 AAACCGAAGGTGACAAACGGCGTCTGGCCGTTGGCGGTGTGCAGCGTATTAACCTCATAT 142671
Query 124512 TCTAGGCTTTGCATTGCATCATA-CACGGCTTTGCGA---GTCTTTTCAATAGCGTATTG 124567
|| || || | || ||||| ||| ||| || | || | ||| | |
Sbjct 142672 TCCAGCGACTGGAAGGCGTCATAACACTCTTTTTCGGTACGGCTGTG----AGCAAA--G 142725
Query 124568 CCTTTG--ATCTGGAATTTTCCAATAACGCGCTTCATCCAAATGCTT-TTCATG-TGTCA 124623
|| | ||||| ||| | ||| | || | ||| || || | | || |
Sbjct 142726 CCATCCGCATCTGCAATCTGCCACTCTTCGGCAGTCTGACGATGTTTATTGAAGCTGGCG 142785
Query 124624 TCTTAACATAAGGTGCCAATGCTTCGTCAATGCGATTAATTGTGTTGCCACCATAAATGT 124683
| || | || |||| | ||||||| ||||| ||||| || |||| || ||||| |
Sbjct 142786 G--TGACGAACGGCGCCAGTACTTCGTCGATGCGGTTAATGGTCGTGCCGCCGTAAATAT 142843
Query 124684 GACTTGCAACCTGTGCAATGATTTGAGCAGTAACAGCCGCAGCGGTAGCGATGCTCTTAG 124743
| || || ||||| || || || || || || || |||| ||||| | || ||| |
Sbjct 142844 GGCTGGCGACCTGCGCGATAATCTGCGCGGTGACGGCCGTTGCGGTGGAAATAGACTTTG 142903
Query 124744 GAGTTTCGATCTGTGCATTACCCATGCGGAACCCACGCTCTAACATGCCGTTGAGATCAA 124803
| || || || | ||||||||||| ||| || | | |||||||| || || || |
Sbjct 142904 GCGTGTCAATTTCCGCATTACCCATTTTGAAACCGTGATTCAACATGCCTTTAAGGTCGA 142963
Query 124804 TCAACATGCAGTTAAACATTGGGAAGAACGGAGAGTAATCAAGATCATGGAAGTGAATAA 124863
||| ||||||||||||||| ||||||||||| || ||||| || ||||| | || ||
Sbjct 142964 TCAGCATGCAGTTAAACATCGGGAAGAACGGGGAATAATCGAGGTCATGATAATGGATTT 143023
Query 124864 AACCAGCTTCGTGTGCTTGCAGAACTTCGGTCGG---CAGATAGTGCTTTGCAAAGTGCT 124920
||| || || || ||| || || ||| | || || || || | ||||
Sbjct 143024 CGCCACGCTCATGCGCCAGCACGACATCACGCGGTAAAATATGCTGTTTGGCGTAATGCT 143083
Query 124921 TGCTTACTATGCCCGCGACTAAATCGCGTTGTGTCGGAATAACTTTTGCATCTTTGTTTG 124980
|| || || ||||| | | || || || ||||| || ||||| |||||||| |
Sbjct 143084 TGGCGACAATACCCGCCAGCAGGTCACGCTGGGTCGGGATCACTTTGCTGTCTTTGTTGG 143143
Query 124981 CATTCTCATTCATGATCCCTTCGTCTT-CTTGCTTC-ATCAGTCCGACGATTCGCTTGGT 125038
||||||| || | | | | | | || ||| ||| | ||| ||| |||| || |
Sbjct 143144 CATTCTCGTTGAGCAGCGC--CATATTGCTTTGTTCAACCAGACCGCGGATTTCCTGATT 143201
Query 125039 CATATCGCTGTTCATATCGCGAGCAACGTCACGATCATAGCGGTATTCGATGTAGGCGCG 125098
|| | || ||| || || || || || |||| |||||||||||| || |||||
Sbjct 143202 CAGACGGCCACGCATTTCACGTTTCACATCGCGGTCATGGCGGTATTCGATATATGCGCG 143261
Query 125099 AGCCA 125103
||||
Sbjct 143262 TGCCA 143266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 720109466233920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |