Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq785 262 6e-65 >seq785 Length=396209 Score = 262 bits (290), Expect = 6e-65 Identities = 1234/1925 (64%), Gaps = 75/1925 (4%) Strand=Plus/Plus Query 123218 CATATGTTTGACACGACGCTGGACTTCGTCCTGTTTGCCGACGTTAAATGCGCGAG-ATC 123276 || |||||| | || |||| ||||| ||||| || ||| ||||||| | || | ||| Sbjct 141378 CAGATGTTTAATCCGGCGCTTCACTTCTTCCTGCTTACCGGCGTTAAACGGACGGGCATC 141437 Query 123277 CAGGGTTACCCAAATACCCACAGACGCGACGAATAACGTTCATCTT--ACGGTCATCGTG 123334 | ||| | || | ||| ||||| ||||| || | || || | ||| ||||| Sbjct 141438 C-GGGCTGCCGAGATAACCACACACGCGGCGGGTGACTGACACGCGGGAAGGT--TCGTG 141494 Query 123335 ATTGCCACACTTCGGACATTCGTATCCTTTAGAAGTAGCGGTA-AACTCACCGTTAAATC 123393 |||||| || |||||||| ||||||| || || | || || ||| || | | Sbjct 141495 ATTGCCGCATTTCGGACAGGTAAATCCTTTGCTGGT-GCATTCGAATTCGCCGGTATAGC 141553 Query 123394 CACATTCAAAACAAACATCAACTGGAGTGTTTGTTCCATAGTACGGAGTGTTCCGATAAG 123453 | || || | || |||| | ||| ||||| || || || ||||| | |||| Sbjct 141554 CGCAGTCGTAGCATTCATCGATTGGCGTGTTGGTGCCGTAATACGGCACGCGGGTATAAC 141613 Query 123454 CATAATCCCAAACTGCTTCGAGTGCTTCCAGATTGTGTTTCATATTCGGATATTCACCGT 123513 |||||||| || |||| || |||| ||||||||||| || || || ||||| || | Sbjct 141614 TGTAATCCCACACGTCTTCCAGCGCTTTCAGATTGTGTTGCAGGTTAGGGTATTCGCCAT 141673 Query 123514 ATGAAATGAAACCACCGGTACTAAGCGGAATGAATTGCTTTTCAAAATCGATCTTGTCAT 123573 | | |||||||| ||| | || || || | || ||| || |||| || || | Sbjct 141674 AGCAGATGAAACCGCCGTTGCTGAGTGGCGGATACGGCGCTTCGAAGTCGAGTTTTTCGT 141733 Query 123574 ACGGATTTGTGTTCATATCCACAGACAGATGGAAGCTGTTTGTGTAATAGTCTTTATCAA 123633 |||||||| ||| | || || ||||||||||||||| ||||| || |||||||| Sbjct 141734 ACGGATTTACCTTCTTCTCGACGTCCAGATGGAAGCTGTTGGTGTAGTAACCTTTATCAG 141793 Query 123634 ACACCTTGTGCTC-ATACAGA-----GCGTGATCGATCTTAGCGAAACGATAACACAGAC 123687 ||| | | | | | || || | ||| | | ||| || | ||||| Sbjct 141794 TCACACCGGCCACCAGCCCGAATTCGGCTTTATCCAGACGACAGAAGCGGTCGCACAGGT 141853 Query 123688 TTTCAGATGGAGTGCCATACAGACT-AAACGCCAGTCCAGTTTCTGCTTTCCACGCATTA 123746 |||| || |||| ||||| || |||| || || ||||| ||||||| || || Sbjct 141854 TTTCGCTCGGCGTGCTGTACAGGCTGAAACCGTAGCCC-GTTTCGTCTTTCCA-GCTTTC 141911 Query 123747 GCCATTTC---TTTCATGCGAG--ACAATACGTC-CAGCAAGAATGCTTGTTTCTCGGCG 123800 | || | ||||| |||| ||||| || | | || || || || | || Sbjct 141912 GG--TTGCCGCTTTCAGACGAGCCACAAT-CGCCTCGGCTTTTTCGC--GTAACTGGCCG 141966 Query 123801 TTTTCCATAACGTGCGATTCATCGTTGAAC------TTGATGATCTCAGATACTTCATGC 123854 || | ||||| | | | | |||| || ||| | ||||||| Sbjct 141967 GCGTCGAACACGTGGGTCTGGTTGCCGAACAGCGCGTTAATGGT---------TTCATGC 142017 Query 123855 AATCCAATATAGCCAATGCTAACAGATGCGCGACCATTTTCAAA--TGCTTTCATGATGT 123912 | ||||| || || | || || || || ||||||| || ||| | || | Sbjct 142018 ACGCCAATGTATCCGAGCGAAATCGAGGCACGGCCATTTTTGAAGATGCCGGAA--ATAT 142075 Query 123913 CATCATTTGGTTTCAGACGAACACCACAAGCACCTTCAACATAAAGAATCGGAGCAACGC 123972 | || | | |||||| || ||||| || |||||||| | || || || || || |||| Sbjct 142076 CGTCGTCAGCTTTCAGGCGCACACCGCACGCACCTTCCATGTACAGGATTGGCGCCACGC 142135 Query 123973 TTGCCTTGACACCACGCAGACGATCAACGCGAGTCAACAAAGCTTTCTTAACGATTTCCA 124032 || |||| || |||||| ||| ||| |||| || |||||||| | | || Sbjct 142136 GGGCTTTGATGCCTTCCAGACGTGCAATGCGGGTCATCAGCGCTTTCTTCGCCAGCAGCA 142195 Query 124033 TACGCTCTTCCAGAATTTCAAAGAAGCGCATTTGATTGCCGTTTGCGTCGAGTGCGATAC 124092 |||||| || || | | | |||| | || | || ||| || || || || |||| Sbjct 142196 AACGCTCGTCGAGCAGTGCCCAGAACGCCGCTTCGTCGCGGTTCGCTTCCAGCGCAATAC 142255 Query 124093 GCGGCAAGTTCAGAGTAACAACACCGAGATTGTTTCTGCCTTCATGAA-CTTCATTACCG 124151 |||||| ||||| | | || |||| ||| || | ||| || || | | || | || Sbjct 142256 GCGGCAGATTCAGGCTGATCACGCCGATATTATTGCGGCCCTCGTGGATCATC-TCGCCA 142314 Query 124152 GTTTCGTCTTCCCAGCGATGCAAGAAACTACGGCATCCCATAGGGAACTTAAAGCTACCA 124211 |||| || | | || || |||||| ||||| ||||| || || || ||| Sbjct 142315 TTTTCTTCATACACGCC---CAGGAAACTGCGGCAGCCCATCGGCGTTTTGAACGAACCT 142371 Query 124212 GTCACTTCTACCACTTTATCATAACTCAAGATGTCTGGATACATACGCTTGGCAGCGCAC 124271 || |||| ||||| | ||||||| | | |||||| || |||||||||||| ||||| Sbjct 142372 GTGACTTTCACCACCTGATCATAATTGAGGATGTCCGGGTACATACGCTTGCTGGCGCAT 142431 Query 124272 TCCAGTGCCATCTGTTTGATACGATACAGAGGATCAGTTGGTTTCAAGTTGTGTCCGTCT 124331 |||||||||| || ||||| || | ||| | ||| || | ||||| Sbjct 142432 TCCAGTGCCAGTTGCTTGATGTCGTAGTTGGCGTCACCGGCTTTATGATTCAGGCCGTCA 142491 Query 124332 TTCAGCGCGAAAACAAGTTTCGGGAAAACGGGAGTAATACCTTCTTTGCCAAGACCTTTC 124391 | || || || ||||| ||||| || | || | | | |||||| || || Sbjct 142492 CGGATGGCAAACACCAGTTTTGGGAATACAGCGGTTTTGCGATTTTTGCCCAGTCCGGCA 142551 Query 124392 ATCCGAACTTTCAGAATTGCTTCCTGAATGAGTTCGGATTCCCAGCTAGTGCCTAGTCCA 124451 || || |||||||| || ||| || || ||||||||| ||||| || ||| Sbjct 142552 ATGCGGTTACGCAGAATTGATTGCTGGATCAGGCGCGATTCCCAGGATGTGCCGAGGCCA 142611 Query 124452 AACCCGAAAGTGCAGAATGGAGTTTGACCATTTGCCGAGTGCAGAGTGTTTACCTCATAC 124511 || ||||| ||| || || || || || || || | |||||| || || |||||||| Sbjct 142612 AAACCGAAGGTGACAAACGGCGTCTGGCCGTTGGCGGTGTGCAGCGTATTAACCTCATAT 142671 Query 124512 TCTAGGCTTTGCATTGCATCATA-CACGGCTTTGCGA---GTCTTTTCAATAGCGTATTG 124567 || || || | || ||||| ||| ||| || | || | ||| | | Sbjct 142672 TCCAGCGACTGGAAGGCGTCATAACACTCTTTTTCGGTACGGCTGTG----AGCAAA--G 142725 Query 124568 CCTTTG--ATCTGGAATTTTCCAATAACGCGCTTCATCCAAATGCTT-TTCATG-TGTCA 124623 || | ||||| ||| | ||| | || | ||| || || | | || | Sbjct 142726 CCATCCGCATCTGCAATCTGCCACTCTTCGGCAGTCTGACGATGTTTATTGAAGCTGGCG 142785 Query 124624 TCTTAACATAAGGTGCCAATGCTTCGTCAATGCGATTAATTGTGTTGCCACCATAAATGT 124683 | || | || |||| | ||||||| ||||| ||||| || |||| || ||||| | Sbjct 142786 G--TGACGAACGGCGCCAGTACTTCGTCGATGCGGTTAATGGTCGTGCCGCCGTAAATAT 142843 Query 124684 GACTTGCAACCTGTGCAATGATTTGAGCAGTAACAGCCGCAGCGGTAGCGATGCTCTTAG 124743 | || || ||||| || || || || || || || |||| ||||| | || ||| | Sbjct 142844 GGCTGGCGACCTGCGCGATAATCTGCGCGGTGACGGCCGTTGCGGTGGAAATAGACTTTG 142903 Query 124744 GAGTTTCGATCTGTGCATTACCCATGCGGAACCCACGCTCTAACATGCCGTTGAGATCAA 124803 | || || || | ||||||||||| ||| || | | |||||||| || || || | Sbjct 142904 GCGTGTCAATTTCCGCATTACCCATTTTGAAACCGTGATTCAACATGCCTTTAAGGTCGA 142963 Query 124804 TCAACATGCAGTTAAACATTGGGAAGAACGGAGAGTAATCAAGATCATGGAAGTGAATAA 124863 ||| ||||||||||||||| ||||||||||| || ||||| || ||||| | || || Sbjct 142964 TCAGCATGCAGTTAAACATCGGGAAGAACGGGGAATAATCGAGGTCATGATAATGGATTT 143023 Query 124864 AACCAGCTTCGTGTGCTTGCAGAACTTCGGTCGG---CAGATAGTGCTTTGCAAAGTGCT 124920 ||| || || || ||| || || ||| | || || || || | |||| Sbjct 143024 CGCCACGCTCATGCGCCAGCACGACATCACGCGGTAAAATATGCTGTTTGGCGTAATGCT 143083 Query 124921 TGCTTACTATGCCCGCGACTAAATCGCGTTGTGTCGGAATAACTTTTGCATCTTTGTTTG 124980 || || || ||||| | | || || || ||||| || ||||| |||||||| | Sbjct 143084 TGGCGACAATACCCGCCAGCAGGTCACGCTGGGTCGGGATCACTTTGCTGTCTTTGTTGG 143143 Query 124981 CATTCTCATTCATGATCCCTTCGTCTT-CTTGCTTC-ATCAGTCCGACGATTCGCTTGGT 125038 ||||||| || | | | | | | || ||| ||| | ||| ||| |||| || | Sbjct 143144 CATTCTCGTTGAGCAGCGC--CATATTGCTTTGTTCAACCAGACCGCGGATTTCCTGATT 143201 Query 125039 CATATCGCTGTTCATATCGCGAGCAACGTCACGATCATAGCGGTATTCGATGTAGGCGCG 125098 || | || ||| || || || || || |||| |||||||||||| || ||||| Sbjct 143202 CAGACGGCCACGCATTTCACGTTTCACATCGCGGTCATGGCGGTATTCGATATATGCGCG 143261 Query 125099 AGCCA 125103 |||| Sbjct 143262 TGCCA 143266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720109466233920