Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq742 179 5e-40
>seq742
Length=196864
Score = 179 bits (198), Expect = 5e-40
Identities = 1106/1745 (63%), Gaps = 49/1745 (3%)
Strand=Plus/Plus
Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665
|||| || || ||||| ||||| |||| | |||||||||| |||||||| ||||||
Sbjct 47156 GAAAGACCGCAACACATGCTCATGAGGGTATCTGTCGGTATCCACGGGGAAGACATTGAT 47215
Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAAC 111724
|| | | || || ||| || |||| | | || |||| ||||| | || ||
Sbjct 47216 TCAGCCATTGAAACTTACAACCTTCTGTCA-GAGAAATACTTCACTCACGCCAGCCCTAC 47274
Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784
|| ||| ||| | || || | || || |||| ||| ||||| | || | |
Sbjct 47275 TCTATTCTCCGCAGCCACGCCCCGTCCTCAGCTGTCTTCTTGCTTCCTACTGGCCATGAG 47334
Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844
|| ||| || | || || |||| ||| || | | ||||||| | || ||||
Sbjct 47335 CGATGATAGTATTGAAGGGATCTACGACACCCTGAAGCAGTGTGCCCTGGTTTCCAAGTC 47394
Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGG 111904
||||| |||||||| | || | || || ||||||| || || ||
Sbjct 47395 TGCTGGAGGTATCGGCCTTCATGTACACTGCATCCGAGCCAAGGGTTCCTACATCGCGGG 47454
Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964
||| || || || |||| | | || ||||| || || | || ||| || ||
Sbjct 47455 TACTAACGGAGTCTCCAATGGGTTGGTCCCCATGCTGCGTGTGTACAATAACACGGCCCG 47514
Query 111965 CTATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCC 112018
||||||| |||| | || |||| ||| || |||| | || |||||||
Sbjct 47515 CTATGTAGACCAGGGAGGAAA---CAAGAGGCCCGGAGCTTTCGCTATTTACGTTGAGCC 47571
Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078
||||||||||| || | || ||| | || ||| || || | ||||| |
Sbjct 47572 GTGGCACGCGGACATATTTGAATTCTTAGACTTGAAAAAGAATACTGGAAAGGAGGAAGT 47631
Query 112079 GCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137
| |||| || || | |||| || | ||||| || ||||| ||||||||| | || |
Sbjct 47632 TC-GTGCACGTGACTTATTCTACGGCTTGTGGATCCCCGATCTGTTCATGAAGCGTGTCG 47690
Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCC 112196
|| | | ||||| |||| | || || || | || ||||| | ||| |||
Sbjct 47691 AGAGCAACGAGGATTGGAGTCTCATGTGCCCCCACGATGCTCCCGGCTTACACGAGTGCT 47750
Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256
| ||| || || ||||| || || |||||| ||||| | ||| |||| | | |
Sbjct 47751 G-GGGAGAAGAATTTGAGGCTCTGTACACACGCTACGAAGCCGAAGGTCGTTCTAAGAAG 47809
Query 112257 ACGGTGCCAGCTGCCGA-TGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315
| | | | || || || | |||||| || || || | |||||| || || || ||
Sbjct 47810 AAGAT-CAAGGCGCAGACTTTGTGGATGGCCATCATCGAATCTCAAGTAGAAACGGGAAC 47868
Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375
|| || ||||| ||||| ||||| || |||| |||||| || ||| | ||| ||||
Sbjct 47869 CCCCTACATGCTGTACAAGGACGCGTGCAACCGAAAGAGCAACCAACAAAATCTGGGAAC 47928
Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435
|| ||| | |||||||| |||||||| | |||| || ||||||||| ||
Sbjct 47929 TATTAAGTGCAGTAACCTCTGCACAGAAATAGTTGAATACACTTCCAAAGATGAAGTAGC 47988
Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 112495
||| || || | || || |||||| || | ||||| | ||| | ||| |||
Sbjct 47989 TGTCTGCAATTTGGCCTCTATCGCTGTC----AATATGT--TTGTAGATAATAAGGTATT 48042
Query 112496 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555
|| | |||||| || | || || || |||||||| ||||| | |||| | ||||
Sbjct 48043 CGACTTTGAAAAGCTGAAGATCGTAACCAAGACTGTCACTAAAAATTTGAACAAAATTAT 48102
Query 112556 TGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614
|| || |||||||| || ||| ||| | | ||| || ||| | ||||| || |
Sbjct 48103 CGACGTTAACTTTTACCCTGTACCAGA-AGCTAGAACATCGAACATGCGTCACCGCCCCA 48161
Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTT--TG---TCGCCACGCATT 112669
| ||| | || | ||||| || || |||| || |||| || | || | ||
Sbjct 48162 TCGGTATTGGAATACAAGGCCTGGCAGATG-CTTTTGTCTTAATGAGATTGC----CTTT 48216
Query 112670 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGC 112729
||| || |||| || | ||| | |||||||||||| ||||| ||| ||
Sbjct 48217 TGAGAGTGAAAAAGCCCAGCTTCTGAATCAACAAATATTTGAGACATTGTATTACGGTGC 48276
Query 112730 TCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789
||| || || |||| ||| |||| ||| || ||| |||| || || | || |
Sbjct 48277 TCTGGAAGCAAGTTGCGAGCTGGCCGAGAAGGAGGGTACATACGAGACGTACCCAGGATG 48336
Query 112790 TCCAG-CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCAC 112847
||| | | || ||||| | ||||||| ||| |||||||| || | | || ||
Sbjct 48337 TCCTGTCAGCA-AAGGGATTCTTCAATATGAGATGTGGGACAAGAAGCCTACAGATT-TG 48394
Query 112848 TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 112907
| |||||| || | || | ||| | | || | | ||| || |
Sbjct 48395 TGGAACTGGGCTGCCTTGAAAGCTAAGATCGCGATACACGGAGTCAGGAACTCGCTGCTT 48454
Query 112908 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 112967
| ||||| ||||| || ||||||||||| || || || || || || |||| |||||||
Sbjct 48455 CTCGCACCCATGCCTACCGCCTCCACCGCCCAGATTTTAGGAAACAACGAATCCTTTGAA 48514
Query 112968 CCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027
|||| ||| | |||||||| ||||| | | | ||||| || | |||| ||
Sbjct 48515 CCCTTCACTTCCAACATCTACACCAGAAGGGTCTTGTCTGGAGAATTCCAGGTTGTGAAT 48574
Query 113028 AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTC 113087
| ||||| || ||| | | ||| || | | ||| | | || ||||| |||||
Sbjct 48575 CACCATCTACTGCGTGATTTGACCGAGGCTGATTTGTGGGACGACGACATGAAAAATCTC 48634
Query 113088 AT-GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAA 113146
|| || | | || ||||||||||| | | || || | | || | |
Sbjct 48635 ATCATTGCCAAC-AACGGATCCATTCAAAACCTGGACAGAATACCCAAGCACATCAGAGA 48693
Query 113147 GTTGTACCGCACAGTTTGGGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAGA 113203
| ||| |||||||||||||| ||| | || | | || | ||||| || ||
Sbjct 48694 TCTCTACAAGACAGTTTGGGAAATTTCCAACA--AAATA-CTGATCAAGATGGCAGCCGA 48750
Query 113204 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGG-AAAGTCCAACGA 113262
|| || ||| ||||| |||||||| | || || | ||| | || ||||| |
Sbjct 48751 CCGAGGAGCCTTTATTGACCAAAGTCAGTCCTTCAACATACACGTGGCAGAGCCCAACTA 48810
Query 113263 TGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGT 113322
| |||||| ||||||| ||| | || | ||||||| ||| | || || || ||||
Sbjct 48811 CG-GAAAGCTCACTTCTATCCACTTCTATGGCTGGAAGATGGGCTTGAAGACTGGAATGT 48869
Query 113323 ATTAC 113327
|||||
Sbjct 48870 ATTAC 48874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620208297720480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |